| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0135 |
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| Symbol | carB |
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| ID | 6164717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 121924 |
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| End bp | 125001 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641667301 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001793538 |
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| Protein GI | 171184619 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0153019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGACG TTAGAAAGAT CTTGGTGGTA GGGTCGGGCG CCATCAAGGT GGCGGAGGCG
GCTGAGTTCG ACTACTCGGG CTCGCAGGCC TTAAAGGCGT TTAGGGAGGA GGGGATAGAG
ACGGTGCTCG TCAACCCCAA CATAGCCACT ATACAGACGT CGAAGCTTCT GGCGGATAAG
GTCTACTTCG TGCCTATACA GAGGCAGTTC CTGGCGGAGG TCATAGAGAG GGAGAGGCCT
GACGCAATAG CGTGCGGCTT CGGCGGACAG ACGGCGCTGT CGGCCTGCGT AGATCTACAC
GACTCCGGCG TCTTGGATAA ATACGGCGTT AAGGTCGTGG GGACGCCGGT GCGGGGGATA
AAGAGGGCTC TCTCGAGGGA TCTGTTTCAA AAGGCCATGA GGGAGGTCGG CATACCGATC
CCGCCCAGTA GCCCCGCGAG GTCGCCCGAG GAGGCGCTGA AGGTCGCGCG GGAGATAGGC
TACCCGGTGG TCGTGAGGGT GAGCTTCAAC CTAGGCGGCG CGGGCGCCTT CGTCGCCAGG
AGCGAGGAGG ACCTAAGGGC CAGGGTGTAC AAGGCCTTCG CCCAGTCCGC AATTGGGGAA
GTCCTTGTGG AGAAGTACCT GGAGGGGTGG AAGGAGGTGG AGTTCGAGGT GGTGCGCGAC
GCCTACGACA ACGTCGCAGC TGTGGTCTGT ATGGAGAACA TAGACCCAAT GGGCGTACAC
ACGGGGGACT CCATAGTGGT GGCCCCCTGC CTCACCTTGA CAGATGAGGA GTACCAGACT
GCCAGGAACA TCTCCATCGG CGTGGCGCGC GCCATCGAGC TAGTGGGCGA GGGCAACGTC
CAGGTGGCGG TCAACTACGC CGGGCCTGAG CAGTACGCCA TAGAGACAAA CCCACGTATG
TCCCGCTCCA GCGCCCTCGC CTCCAAGGCC TCGGGCTACC CCCTGGCCTT CATCGCGGCT
AAGTTGGCCT TGGGCTACCG CCTAGACGAG GTTTTGAACC AGGTGACGAG GCGGACAGTG
GCGGCGTTTG AGCCCGCGCT TGACTACATA GTGGTTAAAC ACCCGAGGTG GGAGAACGAC
AGATTCGGCG TATCCGAGGG CCTGGGGCCG GAGATGATGT CTATCGGCGA GGCCATGGCG
GTGGGGAGGA CGCTGGAGGA GGCTTGGCAG AAGGCGGTTA GGATGATCGA CATAGGCGAG
CCCGGCCTAG TTGGCGGGCC CATGTTTAGG GAACTTACGC TTGAGGAGGC GAGGCGGTGT
CTAGAGGGGT ACAGGCCCTA CTGGCCGATA TGCGCTGCCA AGGCCATGTA CCTAGGCCTC
TCTATAGACG AGGTGTACAG CTATGTGAAG GTGGATAGGT TCTTCCTAAG GGCTATACAG
CGCGTCGTAG AGGCCTACAA GGCGCTTGAG CAAGGCCGGT ACGACCTGGA GGAGCTGAAG
GTCTTGGGCT TCTCAGACGG CCAGATAGCA AGAGCGCTGG GGGTCGAAGA GGAGGAGGTG
AGGCGGGCGA GGAGGCGGCC GGTGGTGAAG AGGATAGATA CGCTAGCCGG CGAGTGGCCG
GCCGAGACGA ACTACCTCTA CCTCACCTAC GGCGGCGTGT ACGACGACGA CGTGCCGCGG
GTGGACTACC TAGTGGTGGG CGCCGGAGTC TTTAGAATAG GCGTGAGCGT GGAGTTCGAC
TGGTCCACGG TGAACCTGGC GCAGGAGCTG AGAAACAGGG GGTTTAAGGT GGCTATCCTG
AACTACAACC CCGAGACGGT GTCGACGGAC TGGGACATAG TGGATAAGCT CTACTTCGAC
GAGATCTCCA GCGAGAGGAT ACTGGACATA GTGGAGAAGG AGGGCGGCGG CGTCGCGGTT
GTCCTCTACG CGGGAGGCCA GATAGGCCAG AGGCTTTATA AGCGTCTTGA GGCGGCGGGG
GTGAAGATCG GGGGGACCCG CGCCGCCTCT ATAGACGCGG CGGAGGACAG GAGCAAGTTT
TCGGAGCTTC TGGAAAAGCT CGGCATAAAA CAGCCGCCGT GGTTCGCCGC TAGATCCCCA
GAGGAGGCGG CTAAGCTCGC CGAGGCGCTG GGCTACCCCG TGTTGGTGAG GCCCAGCTAC
GTCCTAGGCG GCACCTATAT GGCCGTGGCT TACGACAGGG AGGAGCTCCT GAGCTTCCTC
ACAAAGGCGG CTAGGGTGAG CGGGGAGTAC CCGGCGGTTG TGTCCAAGTT CATGCCGCGC
GGCGTTGAGG CGGAGGTAGA CGCCGTGTCT GACGGAGTTC GGCTCGTCGC CACACCAATC
GAGCACGTGG AGCCGCCTGG CGTTCATTCC GGCGACTCCA CCATGGTGCT CCCGCCGAGG
AGGCTGGAGG AGGGGGCCGT CAAGAAGATG GTTGAGGCTA CTCAGAGGAT CGCCGCCGAG
CTCGGGGTCA AGGGCCCTCT CAACGTCCAG TTCATAGTCT ACGATGACGT GTACGTAATA
GAGGCGAACC TCAGGGTAAG CCGCTCCATG CCCTTCGTGA GCAAGGCCAC GGGGGTGAAC
TACATGTCTC TGACGGCCGA CGTGTTGGTG AACGGCCGCC TAGCCGTAGA CGAGGAGGTC
GTGGTGCTTA AGCCGACGAA GTGGTGGGTG AAGTCTCCGC AGTTCTCTTG GTCTAGGCTG
AGGGGGTCGT ACCCGCGGCT GGGGCCTGTG ATGTACAGCA CTGGGGAGGT GGCCTCAAAC
GGGGCCACAT ACGAGGAGGC TCTGCTGAAG AGCTGGCTGT CCGCAGCGCC GAATAGGATA
CCGGAGAGAT CCGCACTGAT ATATACATAT GATAAACACG GCGCGGAGGC CCTTGGGCAA
GCGGCTTCTC TGCTGGCCGG CAGGCTGGAG GTACACACCC CCGAGTCGCT GGGGGAGAAG
GCCGTGGAAA TGTTAAAGTG GAAGAAGATA GACATAGTTA TGACGTCTGG CGTAACGCCG
GAGAGGGATT TCCACATCAG GAGAACCGCG GCCGACACCA ACACGCCGTT GGTGCTTGAC
GCGTCGCTGG CGCTGGAGTT AGCCAAGGCG TTTACGTGGT ACTACAAAAA CGGGAAGCTC
GAGGTAGCGC CGTGGTAG
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| Protein sequence | MPDVRKILVV GSGAIKVAEA AEFDYSGSQA LKAFREEGIE TVLVNPNIAT IQTSKLLADK
VYFVPIQRQF LAEVIERERP DAIACGFGGQ TALSACVDLH DSGVLDKYGV KVVGTPVRGI
KRALSRDLFQ KAMREVGIPI PPSSPARSPE EALKVAREIG YPVVVRVSFN LGGAGAFVAR
SEEDLRARVY KAFAQSAIGE VLVEKYLEGW KEVEFEVVRD AYDNVAAVVC MENIDPMGVH
TGDSIVVAPC LTLTDEEYQT ARNISIGVAR AIELVGEGNV QVAVNYAGPE QYAIETNPRM
SRSSALASKA SGYPLAFIAA KLALGYRLDE VLNQVTRRTV AAFEPALDYI VVKHPRWEND
RFGVSEGLGP EMMSIGEAMA VGRTLEEAWQ KAVRMIDIGE PGLVGGPMFR ELTLEEARRC
LEGYRPYWPI CAAKAMYLGL SIDEVYSYVK VDRFFLRAIQ RVVEAYKALE QGRYDLEELK
VLGFSDGQIA RALGVEEEEV RRARRRPVVK RIDTLAGEWP AETNYLYLTY GGVYDDDVPR
VDYLVVGAGV FRIGVSVEFD WSTVNLAQEL RNRGFKVAIL NYNPETVSTD WDIVDKLYFD
EISSERILDI VEKEGGGVAV VLYAGGQIGQ RLYKRLEAAG VKIGGTRAAS IDAAEDRSKF
SELLEKLGIK QPPWFAARSP EEAAKLAEAL GYPVLVRPSY VLGGTYMAVA YDREELLSFL
TKAARVSGEY PAVVSKFMPR GVEAEVDAVS DGVRLVATPI EHVEPPGVHS GDSTMVLPPR
RLEEGAVKKM VEATQRIAAE LGVKGPLNVQ FIVYDDVYVI EANLRVSRSM PFVSKATGVN
YMSLTADVLV NGRLAVDEEV VVLKPTKWWV KSPQFSWSRL RGSYPRLGPV MYSTGEVASN
GATYEEALLK SWLSAAPNRI PERSALIYTY DKHGAEALGQ AASLLAGRLE VHTPESLGEK
AVEMLKWKKI DIVMTSGVTP ERDFHIRRTA ADTNTPLVLD ASLALELAKA FTWYYKNGKL
EVAPW
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