Gene Tneu_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0133 
Symbol 
ID6164372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp119579 
End bp120778 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content62% 
IMG OID641667299 
Producthypothetical protein 
Protein accessionYP_001793536 
Protein GI171184617 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1980] Archaeal fructose 1,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.577746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0224851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTTA CGGTTTCCAT AATCAAGGCA GACGTCGGCG GGTTCCCCGG CCACGCCCAC 
GTCCACCCAA AAATGCTGGA GTACGCCGCG GCGAAGCTTA AGGAGGCACA GAAGAGGGGG
GTGATAATTG ACTACTTCGT CTACAACGTA GGCGACGACA TCTCGCTGTT GATGACGCAT
ACGAAGGGCG AGGACAACAA GGACATCCAC GGCCTCGCCT GGGAGACCTT TAAAGAGGTG
ACCGACCAGA TCGCCAAGAG GTTCAAGCTG TACGGCGCTG GGCAGGACCT GCTGAAAGAC
GCCTTCTCCG GCAACATCAG GGGGATGGGG CCCCAGGTGG CCGAGATGGA GTTCGAGGAG
AGGCCCAGCG AGCCCATCAT TGCCTTCGCG GCCGACAAGA CGGAGCCCGG GGCCTTCAAC
CTGCCGCTCT ACAAGATGTT CGCAGACCCC TTCACCACGG CCGGCCTCGT CATCGACCCC
TCGATGCACG AGGGCTTCAT CTTCGAAGTC CTCGACGTGG TGGAGCACAA GGTCTACCTC
CTCAAGACCC CCGAGGACGC CTACTCCCTG CTTGGCCTAA TCGGCACCAC CGGCAGATAC
ATAATTAGGA AGGTGTTCAG GAGGGCCGAC GGCGCGCCGG CCGCCGCCAA CAGCGTGGAG
AGGCTCTCCC TAATCGCCGG GCGGTACGTC GGCAAAGACG ACCCCGTGCT CCTCGTGAGA
GCCCAGTCGG GCCTCCCCGC CGTCGGCGAG GTGCTTGAGG CCTTCGCCCA TCCACACCTA
GTACACGGGT GGATGCGCGG CAGCCACGCC GGGCCTCTGA TGCCGGCCCG GTTTATATCG
GTGGATCCGG AGAGGAGGAT CGCCATTGGG CCAAAGATGA CCAGATTCGA CGGCCCTCCC
AAGGTGGGAG CCCTAGGCTT CCAGCTACAC GAGGGCTACC TCGAAGGCGG CGTAGACCTC
TTCGACGACC CGGCCTTCGA CTACGTGAGG CAGACGGCCG CCCAGATAGC CGACTACATA
CGCCGCATGG GTCCCTTCCA GCCGCACAGG CTACCTCCGG AAGAGATGGA GTACACCGCC
CTACCCAAGA TACTGGCCAA GGTCAAGCCG TATCCGGCGG ACCAGTACGA AAAAGACCGC
AAGAAATACA TAGAGGCTGT GGTAAAAGGC GCCAAGGTCG AGGAGTCTCA ACACGACTAG
 
Protein sequence
MRVTVSIIKA DVGGFPGHAH VHPKMLEYAA AKLKEAQKRG VIIDYFVYNV GDDISLLMTH 
TKGEDNKDIH GLAWETFKEV TDQIAKRFKL YGAGQDLLKD AFSGNIRGMG PQVAEMEFEE
RPSEPIIAFA ADKTEPGAFN LPLYKMFADP FTTAGLVIDP SMHEGFIFEV LDVVEHKVYL
LKTPEDAYSL LGLIGTTGRY IIRKVFRRAD GAPAAANSVE RLSLIAGRYV GKDDPVLLVR
AQSGLPAVGE VLEAFAHPHL VHGWMRGSHA GPLMPARFIS VDPERRIAIG PKMTRFDGPP
KVGALGFQLH EGYLEGGVDL FDDPAFDYVR QTAAQIADYI RRMGPFQPHR LPPEEMEYTA
LPKILAKVKP YPADQYEKDR KKYIEAVVKG AKVEESQHD