Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0124 |
Symbol | |
ID | 6166109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 109341 |
End bp | 110594 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641667290 |
Product | transposase IS605 OrfB |
Protein accession | YP_001793527 |
Protein GI | 171184608 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00276741 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTACGCAT ACAGAACGCT GAGGGTGGAA ATCCCCTGGC GGTTGGTCGA AAAGCGGCCA GACGTTCTGG ATCTAGTGAC GCGCATGTAT CTGGCCGTGG AAGAATACGC CAGGAGACTG TTGAAGGAGA TTGCGGGACA AGAGGAGCCG AAACTGACGG CGGAGGAGCT GGACAGACTC CTCACTCCCG AGAGGCGGGA GCTGGCGCGC CGGATTATCG AAGAGGTGTT TCCCAAGTAT GGTCTCAAGA AGTACTTCGT AAAACAAGCT AAGATGTTCT GGCGCGACGC GGCATTTTGG CGGACAGTCC CACTTGACGC CCAGCTTAGA GTTGAAAACG AGAAAGACGT TAGCAGGTCA GTCTTCGTCG ACTTAAAGAG CGGCGTCCTC AAAGTGCGGA AGTTAGGCAT ACCGCCTTTC GCCGTCAAGC TGAAGAAGAG CAACGTCGCC TGGATTAGGC GGAGGTTGGA GGAGGGTGCC AGACTCAAGT TGGCGTTTCT CGGCGTTGAA AAGAGAGGTG GTGAGAAGGA ACCGACCTAT GGAAGACTCT ACGTTGCCCT TGTCTTCGCC CGCGAAGCGG CGCCTGTGGA GCCCAGGGCT ATTGTCGTTG TCGACGTGAA CCGACTTGAC CACGGCGTCG TGGTGGGGCT CGTTGTGGAC GGCAAGGTTG TCAAGCGGAA GAGACTCCCC GACGAGGGTG CGGTAAGGGG GCTGAGGAAG CTCCACGAGG AGATAAGCCG TCTCGACGAG CGGGCCGCGA GGGAGGCGGA CCCCGTCAGA AGGAGACGTC TCGAAGACAG AGCCCGCCAC CTCGCATCAA AGCGGTATAG GAAGATAAGA GGCGTCGTTA AAGACGTCGT AAGCGAGATA ATTAAGCTGG CGAGGGAGCA TCAAGCCGCC GTCGTGGTAG ACACGATAGA GGACGAGAGC TACCGGGAGC TCAAGGAGGG CAACGGGAGC GGCGAAAAGA AGCACCTCCT AGACGGGCTT GGACAGCTTA GGAGGAGGTT ACAGGCGCTT ACGGAATGGT ACGGCCTGCC GTATTTGGAG GAACGGTTGT ATTCAACAGT GTGTCCCCGT TGTGGAGCAA AGATGGAGGA GAGAAAGCGC GTAATGCGTT GTCCCTCCTG CGGCTTCTCA GACCACAGAG ACAACGTGCC GTTGCTCTGG GCAAAAAGGA GGTACTGGGA GATCCTCCAG AAACAACCCG TTTTTTCCTC CACACTGGCG ACCATCACAC TTTTAAGCTT GTAA
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Protein sequence | MYAYRTLRVE IPWRLVEKRP DVLDLVTRMY LAVEEYARRL LKEIAGQEEP KLTAEELDRL LTPERRELAR RIIEEVFPKY GLKKYFVKQA KMFWRDAAFW RTVPLDAQLR VENEKDVSRS VFVDLKSGVL KVRKLGIPPF AVKLKKSNVA WIRRRLEEGA RLKLAFLGVE KRGGEKEPTY GRLYVALVFA REAAPVEPRA IVVVDVNRLD HGVVVGLVVD GKVVKRKRLP DEGAVRGLRK LHEEISRLDE RAAREADPVR RRRLEDRARH LASKRYRKIR GVVKDVVSEI IKLAREHQAA VVVDTIEDES YRELKEGNGS GEKKHLLDGL GQLRRRLQAL TEWYGLPYLE ERLYSTVCPR CGAKMEERKR VMRCPSCGFS DHRDNVPLLW AKRRYWEILQ KQPVFSSTLA TITLLSL
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