Gene Tneu_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0124 
Symbol 
ID6166109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp109341 
End bp110594 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content57% 
IMG OID641667290 
Producttransposase IS605 OrfB 
Protein accessionYP_001793527 
Protein GI171184608 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00276741 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTACGCAT ACAGAACGCT GAGGGTGGAA ATCCCCTGGC GGTTGGTCGA AAAGCGGCCA 
GACGTTCTGG ATCTAGTGAC GCGCATGTAT CTGGCCGTGG AAGAATACGC CAGGAGACTG
TTGAAGGAGA TTGCGGGACA AGAGGAGCCG AAACTGACGG CGGAGGAGCT GGACAGACTC
CTCACTCCCG AGAGGCGGGA GCTGGCGCGC CGGATTATCG AAGAGGTGTT TCCCAAGTAT
GGTCTCAAGA AGTACTTCGT AAAACAAGCT AAGATGTTCT GGCGCGACGC GGCATTTTGG
CGGACAGTCC CACTTGACGC CCAGCTTAGA GTTGAAAACG AGAAAGACGT TAGCAGGTCA
GTCTTCGTCG ACTTAAAGAG CGGCGTCCTC AAAGTGCGGA AGTTAGGCAT ACCGCCTTTC
GCCGTCAAGC TGAAGAAGAG CAACGTCGCC TGGATTAGGC GGAGGTTGGA GGAGGGTGCC
AGACTCAAGT TGGCGTTTCT CGGCGTTGAA AAGAGAGGTG GTGAGAAGGA ACCGACCTAT
GGAAGACTCT ACGTTGCCCT TGTCTTCGCC CGCGAAGCGG CGCCTGTGGA GCCCAGGGCT
ATTGTCGTTG TCGACGTGAA CCGACTTGAC CACGGCGTCG TGGTGGGGCT CGTTGTGGAC
GGCAAGGTTG TCAAGCGGAA GAGACTCCCC GACGAGGGTG CGGTAAGGGG GCTGAGGAAG
CTCCACGAGG AGATAAGCCG TCTCGACGAG CGGGCCGCGA GGGAGGCGGA CCCCGTCAGA
AGGAGACGTC TCGAAGACAG AGCCCGCCAC CTCGCATCAA AGCGGTATAG GAAGATAAGA
GGCGTCGTTA AAGACGTCGT AAGCGAGATA ATTAAGCTGG CGAGGGAGCA TCAAGCCGCC
GTCGTGGTAG ACACGATAGA GGACGAGAGC TACCGGGAGC TCAAGGAGGG CAACGGGAGC
GGCGAAAAGA AGCACCTCCT AGACGGGCTT GGACAGCTTA GGAGGAGGTT ACAGGCGCTT
ACGGAATGGT ACGGCCTGCC GTATTTGGAG GAACGGTTGT ATTCAACAGT GTGTCCCCGT
TGTGGAGCAA AGATGGAGGA GAGAAAGCGC GTAATGCGTT GTCCCTCCTG CGGCTTCTCA
GACCACAGAG ACAACGTGCC GTTGCTCTGG GCAAAAAGGA GGTACTGGGA GATCCTCCAG
AAACAACCCG TTTTTTCCTC CACACTGGCG ACCATCACAC TTTTAAGCTT GTAA
 
Protein sequence
MYAYRTLRVE IPWRLVEKRP DVLDLVTRMY LAVEEYARRL LKEIAGQEEP KLTAEELDRL 
LTPERRELAR RIIEEVFPKY GLKKYFVKQA KMFWRDAAFW RTVPLDAQLR VENEKDVSRS
VFVDLKSGVL KVRKLGIPPF AVKLKKSNVA WIRRRLEEGA RLKLAFLGVE KRGGEKEPTY
GRLYVALVFA REAAPVEPRA IVVVDVNRLD HGVVVGLVVD GKVVKRKRLP DEGAVRGLRK
LHEEISRLDE RAAREADPVR RRRLEDRARH LASKRYRKIR GVVKDVVSEI IKLAREHQAA
VVVDTIEDES YRELKEGNGS GEKKHLLDGL GQLRRRLQAL TEWYGLPYLE ERLYSTVCPR
CGAKMEERKR VMRCPSCGFS DHRDNVPLLW AKRRYWEILQ KQPVFSSTLA TITLLSL