Gene Tneu_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0099 
Symbol 
ID6164334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp84911 
End bp86218 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content65% 
IMG OID641667266 
Producthypothetical protein 
Protein accessionYP_001793503 
Protein GI171184584 
COG category[R] General function prediction only 
COG ID[COG4882] Predicted aminopeptidase, Iap family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.428389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00133655 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGCCGAGG TGTACGCAAA ATGCACCTCC TACAGGGATC TCGTGGCGGG GTCCCCCGCC 
GAGAGGGAGT TTCTACAGTG GCTGATGGCC TTCCTCGACT CGCCGAGCCT CTGGTTCCAC
CTATCGCCTG TGGAGGTCCT ACACTGGGAG GACCTCGGCA CGAGGCTCGT GGTGGGGGGC
GAGGAGGAGG TGGGCCTGGC GATGCCCTAC TCCCGCCCAA CCTCGGTGGA GGGGAGGCTG
GCGCCTTTAG ACGGCGACGT GGAGGGGAAC ATAGCCGTTG CCGACCTCCC GGCGGATTTA
GACGACGCAA AGTACATAGT TCTAGAGGCC GCGCGCCGGG GGGCCTCGGC CGTCGTCTTC
ACGGGGGAGC GGCCGCGTCG GATAGTGGTC ACCGGCGAGC CCGGGTTCAA GAGCGACGCC
GCCCCGCCGC CTATACCGGC GGCGAGCTTC GGAGACCTCA AACGGCACTT GGGCAGGCGG
GCGAGGCTGG AGGTGGCGAC CAGGTCTAGG GTTACGTACA GCTACAGCTT GATCGCCTTT
AACAGCTTCG AGAACACCCC CATGATATCG GCCCACTGGG ACCACTGGCT TGTAGGCGCT
ACGGACAACT GCGCGGGGGT TGAGGCAGCT GTTTTAGCGT TCGTCGAGCT AGCCGCGGGG
GAGTTCCCCA TCGCCCTCGG GCTTTTCACG GCGGAGGAGG GGGTGGCGCC GCATGTGCCG
TCCTTCTACT GGGCCTGGGG GTCTTTCAAC TACCTGAGGC GCTGGAGGCC TACCCTGTTG
GTGAACGTGG ACGTGGTGGG GGTTGGGACC CCCCGCATCT ACGCCATGCC CTACCTCCAC
GAGGAGCTTA AGTCGCTTGG CCCCGTGGAG TGGCCCGTGG CGTATTTCGA CAGCGTACAC
TACGAGAGGT GGGGGCTCCC CGCCTTGACC ATCTCGTCGC TGAGAGACGC CTGGGATAGA
TACCACAGCC CCGCCGACAG CCACGTCGAT GTTGAAAACG TCCTCTACGT GGCCGAGTTG
GCGAAGCGTG CCGTGAAGGT GAAGCCCAGG GCTCCCCAGG TGGGGCTTGA GGAATACGGC
TTGGCGAACC CCGAGGCGGA TCCCTACGCC GCGTGGTCCG CCGTGTATAA CTACCTCGTC
CTCTTCAGAG ACCTCAGACA TTCGGAGATC GTCTACGCCA ACGTGCCCAG GTTCTTGAGG
GGCGAGGCGG GGAGCTACAG CAGGATAGAT CTGCTGGGGG GCCCCACTCT CTGTGTTGGG
GACTGCGCCG GCGCCTTCGA GACCTACCGG GCGCTACTTG GCCTCTAG
 
Protein sequence
MAEVYAKCTS YRDLVAGSPA EREFLQWLMA FLDSPSLWFH LSPVEVLHWE DLGTRLVVGG 
EEEVGLAMPY SRPTSVEGRL APLDGDVEGN IAVADLPADL DDAKYIVLEA ARRGASAVVF
TGERPRRIVV TGEPGFKSDA APPPIPAASF GDLKRHLGRR ARLEVATRSR VTYSYSLIAF
NSFENTPMIS AHWDHWLVGA TDNCAGVEAA VLAFVELAAG EFPIALGLFT AEEGVAPHVP
SFYWAWGSFN YLRRWRPTLL VNVDVVGVGT PRIYAMPYLH EELKSLGPVE WPVAYFDSVH
YERWGLPALT ISSLRDAWDR YHSPADSHVD VENVLYVAEL AKRAVKVKPR APQVGLEEYG
LANPEADPYA AWSAVYNYLV LFRDLRHSEI VYANVPRFLR GEAGSYSRID LLGGPTLCVG
DCAGAFETYR ALLGL