Gene Tneu_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0097 
Symbol 
ID6164393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp83784 
End bp84422 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content65% 
IMG OID641667264 
Producthypothetical protein 
Protein accessionYP_001793501 
Protein GI171184582 
COG category[S] Function unknown 
COG ID[COG4021] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0393817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0023307 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGACCCCC TCAAGAGGTT GCTCATGGAG AACCCCAGGC ATCTGGAGAT GCGCTACAGA 
GAGCGGGAGG CCGTATGCGA GCCGGCTTCG CCGCCGGTGG CCGTGAGGCT AGACGGCGTG
GGCTTCGGCA AAAGGCTTAG GGATTTCCCA GCGCCTAGGA GCCGGCTTGT GCACACGGCC
ATCGCCGAGG TGGCGAGGGA CTTGGCAGCC CAGCATGGGG CCGAGTTCGT GCACGTGGTA
AGCGACGAGA TAAACCTGCT GTTTCTCACC TCGGTGCCGT ACGGCGGCAG GACCTTCAAG
CTGGCGAGCG TTCTAGCCGC CCAGGCCGCA GCCGGGGTGA CGGCCAAGCT TGGGCGTCCC
CTCTACTTCG ACGGGAGGGT GGTCAAACTC GCCGATAGGT GCGACGCGGC GAGGTACGTC
CTCTTCCGCG CCAGGGTGGG CCTCAACAAC TACGTGGTGA AGGCGGCTAG GCTCGCCGGG
GTTGTGGGGG CAGAGACGCC GCGTATAGAG GAGCTTCTGG CCGCGGTGAA GATAGAGGAC
TTCGAGCTGG CGTGGGGGAG CTTCATGTAT AAAGAGGGGG GCTACGCGAG GTCGGGGGAC
CTCTGCAACG CCGTGTCTCA GCTCTGCGAG ATGTGCTAG
 
Protein sequence
MDPLKRLLME NPRHLEMRYR EREAVCEPAS PPVAVRLDGV GFGKRLRDFP APRSRLVHTA 
IAEVARDLAA QHGAEFVHVV SDEINLLFLT SVPYGGRTFK LASVLAAQAA AGVTAKLGRP
LYFDGRVVKL ADRCDAARYV LFRARVGLNN YVVKAARLAG VVGAETPRIE ELLAAVKIED
FELAWGSFMY KEGGYARSGD LCNAVSQLCE MC