Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0072 |
Symbol | |
ID | 6164947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 66715 |
End bp | 67392 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641667237 |
Product | nucleotidyl transferase |
Protein accession | YP_001793476 |
Protein GI | 171184557 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.155346 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAAGCCG TAGTCCTAGC TGCCGGCCTC GGCACGAGGC TAAGGCCGCT TACTTTCCTA GTCCCCAAGG CCCTCGCCAC GGTGGGGACG AAACCCCTCG TGGACTACGT AATCGAGTGG CTTAGGTTAA ACGGGGTGAG GGAGATAGCT GTGGTGGGGT ACTACATGCA GGACGTGCTG GAGAGGTACC TAGCCCAGTT TCACCCAGAC GTGGTCTTCC TCAGGTCGAG GAAGCTCCTC GGCACTGCCG GCCAGCTGTA CTACGCGAGG GATTGGGTAG ATGGAGACGC CGCCGTGGTG AACACAGACG TGTTAACCAA CCTAGACTTG AGGGCCCCCG CCGAGCTCCA CCGATCGAGG CAAGCGCTTC TAACAGTCGT GGGGCAGATA CACAGGGTGT CTCTGAGGTT CGGCGTTTTG GAGGTGGAGG GCGGGATGCT GAGGAGCTGG AGGGAGAAGC CCACCTTGGA ATACATAACG TCAACAGGTA TTTACATAGT CTCCGAGGGG GTGGTGAAGA GGCTTGGGGA GGAGTACCTC GACATGGACG CCCTCGCCCG GTCTCTGATC CCCAGAGTCG CCGTCTACGT GGCGAAGGAG GCCTTCTTCT ACGACGTGGG CACCATCGAG GATCTGTCGA AGGCGCAGGA GGTTAAACTC GACGGTTTAA AGCCGTAA
|
Protein sequence | MKAVVLAAGL GTRLRPLTFL VPKALATVGT KPLVDYVIEW LRLNGVREIA VVGYYMQDVL ERYLAQFHPD VVFLRSRKLL GTAGQLYYAR DWVDGDAAVV NTDVLTNLDL RAPAELHRSR QALLTVVGQI HRVSLRFGVL EVEGGMLRSW REKPTLEYIT STGIYIVSEG VVKRLGEEYL DMDALARSLI PRVAVYVAKE AFFYDVGTIE DLSKAQEVKL DGLKP
|
| |