| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0063 |
|---|
| Symbol | |
|---|
| ID | 6164373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 51171 |
|---|
| End bp | 53072 |
|---|
| Gene Length | 1902 bp |
|---|
| Protein Length | 633 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641667228 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001793467 |
|---|
| Protein GI | 171184548 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.61129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATGGC TCATTCCCCT GGCGGTGGCG GCGGCGTTGA TCGCCGTGTA CCTCATGTTG
CAACCACCTC CGCCGCCTCA GGCGGGGATA ACTACGACGG CCACGCCGCA ACAGCCCACA
ACCGCCCCAA CCCAAACGAC GGCAACCGCC CAGACGCCAA CCGCGACGGC GCAGCCCACA
GCTACGACGA CAACGGCGCC GCGCCCCCCC GCGCCTCAGC CCGTCTACCT GCCCAAGATA
ACCTGGAGGC TCTCCGCGCC GCCTGTAGTA AACACGACCA AGTTGCCTCT CGCGGTTAAC
TACACCATAA CCCTGGCCAA CGAGGGCAAC GGCACGGGGG CGGTGGAGGT AGACGGCGTG
GTGTACACGC TTAAGCCCGG CGAGAGGATA AACGTTACGA AGAGCGTAGT GGCGAAGACC
GCTGGTAGGC AGAAAATAGC CGTGGTGATC AACGGCACAG AGTACGCCTA CGCCACGGCC
GTTTACTACT ACGCCCCCAA GCTCGTGGCG GAGCCCATCG CGGTAAACGT AACAAAGATG
CCCGCCAACG CCACAGTAGA AATAGTGATC AAAAACGTGG GCAACTACAG CGCGGTGGTC
GACGGCGTTG TTATACAGCC TGGGCAGACT GCCAGGATAA AAACCACGTT AAACATCACG
GCGGCCGGCA CCTACTACGT CAACTACAGC GGCGTACCCA TAGCGGTGAC CGTCAACTAC
CTAACCCCCA ACGTAGAATA CAAGCTGGGC GGCCCCACGT ACCTAGAGGT GCTCCCCGGC
GAAAACGCCA CGGCGTGGCT CTGGCTCTAC AACAGAGGCA ACGCCACGGC GGAGGTCAAA
ATCGACGGCA GAGCCTACGC GATAGCGCCC CGGAGCTACA TCAACATCAC CAAGAGCGTC
AGGATAAACA GCGGCGGGCT CTACGCCGTG GTCTTCCACG CCGAGGGGGC CCTCAACGGC
ACGTTAGAAT GGCGCGTAAA GGCGGCCCTC GTGGCCGTGA GAGTAGAGAT AGTCGTGTGG
AAGCCGGACC TAATGAGGAG CTGGCCGGCG CCCACCGACA CCCTAGCCCT CTCGGTGACC
AGCAAATCGG TAGACATAGC CTGGGGGTAC ATCATATCGA CAAACGCCAC CTACAGACCC
ATCACCTTGA ACATACAGGG ACCTGGAGGC GGGACGTACG TCCTTAAGCC GGGGGCTTAC
ATATCGGCGA ACTCCACAGC CACGCTACAA GCGCCGGGGA CGGGAGAGCT CGCCGTATAC
ATAAACGGCA CCAAATACGC CACCACTATA CGGCTAGACC TAAAGCCGCC CACGGTTTCC
GTGTCAGACG TAAGCCAGAT ATGGTTCGAA GACGCTAGAC CCATATACTC CGTCCAGATA
AACTGCAGAG TGGCAACCAT CCAGTTCGAC CTCATGAGGG TAAGCGGCAC TGTGACATAC
AGCCCCACGG CTACAAACCT ACAGGGGACA ATAACGGTGA AAACAGCAAG CGGCGTCTAC
ACAGGAGACT ACAGCGGATA CGTCTCCGGA AACTCGGGAC ACGTCAGCAT AAGCATAGCA
GGGCGCAGAG TAGACATAGA CTTCACGGTA TCCCCACTAG CCCCAACTAG GATACTGGTA
GACGGAAGCC AAGTCACATG CACAGCGCCC ACATACCTAA TACCACCTGT GCTATACCGA
CAGAAGCCGA CCACCCCGCC GACGTCTGCC ACAGCCTACG CCTCCGCGCT AGTTTCGCTC
TTCGCTAAAC AAGACGGCGA CAGAGCTCAA TCTGCTGTGT GGAACGGAGA CTACGTGGAG
GTCACAGACG GGTGGGGCAA CAAGATGGCT GTGTACATTA GACAGGGCCA GATCGAGATA
AGCGGAGCCC TATCGGCAAG AATTACCGCA GTAATATCAT AA
|
|---|
| Protein sequence | MRWLIPLAVA AALIAVYLML QPPPPPQAGI TTTATPQQPT TAPTQTTATA QTPTATAQPT
ATTTTAPRPP APQPVYLPKI TWRLSAPPVV NTTKLPLAVN YTITLANEGN GTGAVEVDGV
VYTLKPGERI NVTKSVVAKT AGRQKIAVVI NGTEYAYATA VYYYAPKLVA EPIAVNVTKM
PANATVEIVI KNVGNYSAVV DGVVIQPGQT ARIKTTLNIT AAGTYYVNYS GVPIAVTVNY
LTPNVEYKLG GPTYLEVLPG ENATAWLWLY NRGNATAEVK IDGRAYAIAP RSYINITKSV
RINSGGLYAV VFHAEGALNG TLEWRVKAAL VAVRVEIVVW KPDLMRSWPA PTDTLALSVT
SKSVDIAWGY IISTNATYRP ITLNIQGPGG GTYVLKPGAY ISANSTATLQ APGTGELAVY
INGTKYATTI RLDLKPPTVS VSDVSQIWFE DARPIYSVQI NCRVATIQFD LMRVSGTVTY
SPTATNLQGT ITVKTASGVY TGDYSGYVSG NSGHVSISIA GRRVDIDFTV SPLAPTRILV
DGSQVTCTAP TYLIPPVLYR QKPTTPPTSA TAYASALVSL FAKQDGDRAQ SAVWNGDYVE
VTDGWGNKMA VYIRQGQIEI SGALSARITA VIS
|
|---|
| |