| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0060 |
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| Symbol | |
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| ID | 6165047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 44133 |
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| End bp | 46037 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641667225 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001793464 |
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| Protein GI | 171184545 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
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| TIGRFAM ID | [TIGR03675] arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.287706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0538773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTTTTT CGGAAGTTGA GAGTAGGGTA AGGTCTATTC TATCTGGCGC CGAGGTTTCC
AGAGTCAGCT ACGAGGGCCC GAACCTCTGC ATCTATGTGA AGAAGCCCTC GGAGGCTCTC
CTAGACATGG TCGGCGAGGT GGCCAAGGCC CTCAAGAAGC GCGTGGTTTT GAGGACCGAG
GCCTCCAGCA GACTGCCGGA GAAGAAGGCC TCCCAGATAA TTAGGGAGGT GGTGGAGGAC
GTCGACGACG TCGTTTTCGA GGAAAGCGGC GACGTCTATA TCTACCTCGC CAAGCCGATG
CGGGAGAGGG AGATAAGAGC CGTAGCGCGG GAGGTCTTCG TGAGGACCGG CTGGAGGGCT
GTGGTGGAGA GCGGGGTGCC CCGGGACAAG GTCAAGCTCC CTGCCCACGA GATCGTGGGG
GTGCGCCAGA TCTTCCACGG TGCCTACGCC CAGAGGAGGG AGCTTATGGA GCGCTTGGCC
AGATATATAC ACCAGGAGCC GGTGGTCAAG GAGGGGGCGA TAACTGTCAC CTTTCTCGGA
GCCGCGATGG AGGTGGGCCG CAGCGCGATA CTGGTCAGCA CCACCGAGAG CAACGTGTTG
CTCGACTGCG GGCTGAAGCC CGGCCAATAC GACGAGGATT TCCCCATGCT AGACGCCGTA
GATATCGATA GGCTAGACGC GGTTGTGTTA ACCCACGCCC ATATGGACCA CGTGGGCTGC
CTCCCGTTTC TCTACAAGTA CGGCTACAGG GGGCCTGTCT ACATGACCGA CCCCACCAAG
TACCAAGCGT TTATACTCCT CATGGACTAC ATAGAGCTGA AGGAGAGGGA GGGGCTGGAG
CCGGCTTTCT CCAAAGCCGA CGTGGAGTCC GTCATATACC ACACCATAAC GCTGGACTAC
GAGGAGGTCA CCGACATAGC GCCAGACGTC AAGCTGACCT TCTACGACGC GGGCCACGAG
ATCGGGTCTG CCATGGCGCA TCTGCACATA GGCAACGGGA GGTACAACAT CCTCTACACC
GGGGATTTCA AATACGGCAA GACGAGGCTT CTGAACCGCG CCGTGTCTAA GTTCAAGAGG
GTGGAGATGC TCATAATGGA GTCCACCTAC GGCGGTAGAG ACGACGTGCA ACCGCCTAGG
GTTGAGGCCG AGAACGCCTT GGCTAAACAC GTGGCCGAGG CCGTGTCGAG AGGCGGCAAG
GTGCTGATCC CCGCCTTCAG CACGGGGAGG GGCCAGGAGA TCCTCTATAT CCTCAACAAG
ATGATCGAGG GGGGTTTGAT CCCCAGGGTG CCCGTCTACG TAGACGGGAT GATTGTAGAG
ACGCTCAACG CCTACCTCAT GTACCCCCAC TACCTAAACC CCGAGGTCGC CGAGGAGGTC
TACGGCGGGG TCAACCCCTT CACCACCTCG GGAAGCGTGG TCATTGTGGA CCGCGCCAAA
CGGGTGGAGG ATAGGATAAA CCAGGTGGCC AAGATAGCCC AGAGCGAGGA GCCAGCCGTC
ATAATTGCGC CACACGGCAT GTTAAACGGG GGGCCTGTGG TGGACTACTT CTCACAGCTG
GCGCACGACC CGAGGAACAA GCTGGTGTTC GTCTCCTACC AAGCCGAGGG GACGCTCGGC
AGGAGGATCC TAAACGGCGA GAGGGAGTTC GTGGTCAGGA GCTTGGTGGG GGGCGAGGCG
AAGGTAGAGA TGCGGATGGA GGCGGTCTCC ATACCCGGCT TCTCAGGCCA CAGCGATAGG
AGGGAGCTCA TGAAGTACGT GGAGCACCTC GAGCCCAAGC CTAGAAAGAT CGTGTTGATA
CACGGCGAGC CCTCCAAGAT AGTCAGCCTG GCCACCTCCA TAGAGCTGAA GTACAAGATA
ACTACAGTGG TGCCTAAGGT AGGCGAGAGA ATTAGAGCAC TGTAG
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| Protein sequence | MSFSEVESRV RSILSGAEVS RVSYEGPNLC IYVKKPSEAL LDMVGEVAKA LKKRVVLRTE
ASSRLPEKKA SQIIREVVED VDDVVFEESG DVYIYLAKPM REREIRAVAR EVFVRTGWRA
VVESGVPRDK VKLPAHEIVG VRQIFHGAYA QRRELMERLA RYIHQEPVVK EGAITVTFLG
AAMEVGRSAI LVSTTESNVL LDCGLKPGQY DEDFPMLDAV DIDRLDAVVL THAHMDHVGC
LPFLYKYGYR GPVYMTDPTK YQAFILLMDY IELKEREGLE PAFSKADVES VIYHTITLDY
EEVTDIAPDV KLTFYDAGHE IGSAMAHLHI GNGRYNILYT GDFKYGKTRL LNRAVSKFKR
VEMLIMESTY GGRDDVQPPR VEAENALAKH VAEAVSRGGK VLIPAFSTGR GQEILYILNK
MIEGGLIPRV PVYVDGMIVE TLNAYLMYPH YLNPEVAEEV YGGVNPFTTS GSVVIVDRAK
RVEDRINQVA KIAQSEEPAV IIAPHGMLNG GPVVDYFSQL AHDPRNKLVF VSYQAEGTLG
RRILNGEREF VVRSLVGGEA KVEMRMEAVS IPGFSGHSDR RELMKYVEHL EPKPRKIVLI
HGEPSKIVSL ATSIELKYKI TTVVPKVGER IRAL
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