Gene Tneu_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0034 
Symbol 
ID6164938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp25562 
End bp26044 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content61% 
IMG OID641667199 
ProductXRE family transcriptional regulator 
Protein accessionYP_001793438 
Protein GI171184519 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID[TIGR00270] conserved hypothetical protein TIGR00270 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00826547 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTATTGTG AAATCTGTGG AAGGCCCATA GAGGGCGAGC CGATACCGAT AGAGGTGGAT 
AAGGCCGTCT TATACGTCTG CAGAAGTTGC GCCGCCACAT ATGGGAAGAA AGTGATTCAG
CAACAAGCCG CGCCTGCCGT GAAGAAGACG CCGAGGCCTA AGCCCGCCGC CCCCCGCCCG
CCGCCTCCCG AGGTGGAGAT TGTGGAGAAC TTCGGCGAGG TGGTGAAAAA GGCGAGGGAG
AACCTCGGCC TATCTAGAGA GGCCCTAGCC GCCATGTTGG GGGTGAAGGA GACCGTGTTG
AGGAGGATCG AGGCCGGGCA ACTGCAGCCC GACTTCGCCC TAGCGAGGAA GCTGGAGAAA
ACGCTTGGAG TTAGGCTTTT GGTGGAGTCT GTGGAAGAGG GCGTAGCCCA GACGGGGAGG
GGGGCCGAGA GGGGTCTCAC GTTGGGCGAA GTGGCGGAGA TAAGAGACGG GGGTGAGGAA
TAG
 
Protein sequence
MYCEICGRPI EGEPIPIEVD KAVLYVCRSC AATYGKKVIQ QQAAPAVKKT PRPKPAAPRP 
PPPEVEIVEN FGEVVKKARE NLGLSREALA AMLGVKETVL RRIEAGQLQP DFALARKLEK
TLGVRLLVES VEEGVAQTGR GAERGLTLGE VAEIRDGGEE