Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0034 |
Symbol | |
ID | 6164938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 25562 |
End bp | 26044 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641667199 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001793438 |
Protein GI | 171184519 |
COG category | [K] Transcription |
COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
TIGRFAM ID | [TIGR00270] conserved hypothetical protein TIGR00270 |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00826547 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTATTGTG AAATCTGTGG AAGGCCCATA GAGGGCGAGC CGATACCGAT AGAGGTGGAT AAGGCCGTCT TATACGTCTG CAGAAGTTGC GCCGCCACAT ATGGGAAGAA AGTGATTCAG CAACAAGCCG CGCCTGCCGT GAAGAAGACG CCGAGGCCTA AGCCCGCCGC CCCCCGCCCG CCGCCTCCCG AGGTGGAGAT TGTGGAGAAC TTCGGCGAGG TGGTGAAAAA GGCGAGGGAG AACCTCGGCC TATCTAGAGA GGCCCTAGCC GCCATGTTGG GGGTGAAGGA GACCGTGTTG AGGAGGATCG AGGCCGGGCA ACTGCAGCCC GACTTCGCCC TAGCGAGGAA GCTGGAGAAA ACGCTTGGAG TTAGGCTTTT GGTGGAGTCT GTGGAAGAGG GCGTAGCCCA GACGGGGAGG GGGGCCGAGA GGGGTCTCAC GTTGGGCGAA GTGGCGGAGA TAAGAGACGG GGGTGAGGAA TAG
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Protein sequence | MYCEICGRPI EGEPIPIEVD KAVLYVCRSC AATYGKKVIQ QQAAPAVKKT PRPKPAAPRP PPPEVEIVEN FGEVVKKARE NLGLSREALA AMLGVKETVL RRIEAGQLQP DFALARKLEK TLGVRLLVES VEEGVAQTGR GAERGLTLGE VAEIRDGGEE
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