Gene Tneu_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0029 
Symbol 
ID6166110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp20993 
End bp21505 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content59% 
IMG OID641667194 
Producthypothetical protein 
Protein accessionYP_001793433 
Protein GI171184514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00385043 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCGACC TCTACATAGC GGGGGCTGTG GCGGTGCTTT CGGCGATGGG CGGCATCTTC 
ATAAAGGACT TAAAGGCGTT ATCTATCTTC ACAGTTCTGA TAGCCGCAGC CGCCTTCTTG
TTGGCATACG CCGTGGGTAT GCCTGCCGTT GTGCTAGGGC TGGTGGGCCT CTCCACCGCC
GCGGTAAAGA TGGGGAGGGC CGGCAAACGC GTCGTCGAAA GGAAGGTGCG CACCTATAGG
TCGCGGAGGA GGCTAGCGGG TCTTGAGGAG TCGGTGAGGG CCATACCTGA GAACATACTC
GACGTGGTGC CCGCGGGCTC CGTGAGGGCG ATACATCCGA AGATCGTCGG CTTAGTCGCC
TTAATCAACG ACGCCTACTC CAAGGGCTAC ACGGTAGAGG AGCCCGCCTG GTTCAAAGTG
GTTAGGCAGT ACCTCGCCTC GGTGGGGCCT CAATACACCG CGGATAGGGC GAAGGTGATC
TCGGAGTATG AGGTAGTCGA GCTGGAGCGT TAG
 
Protein sequence
MIDLYIAGAV AVLSAMGGIF IKDLKALSIF TVLIAAAAFL LAYAVGMPAV VLGLVGLSTA 
AVKMGRAGKR VVERKVRTYR SRRRLAGLEE SVRAIPENIL DVVPAGSVRA IHPKIVGLVA
LINDAYSKGY TVEEPAWFKV VRQYLASVGP QYTADRAKVI SEYEVVELER