Gene Tneu_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0009 
Symbol 
ID6165019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp5361 
End bp6023 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID641667174 
ProductAMMECR1 domain-containing protein 
Protein accessionYP_001793413 
Protein GI171184494 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.717418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGCG CACTCTTTAA GCCGTATACG ATCGAGGAGG GGGCCTACCT AGTTAAACTG 
GCGAGGCGCG CAGTCGAGAT CTTCCTAAAA ACAGGCCGGG TTGTGGAGCC GGAGGGTCCG
CCGGCCAGGC TACTGTTGGA CAACTACGGG GTGTTTACGA CCATAGAGAC CGCCGGCGAG
AGGCTGGAGC TCCGCGGCTG CATCGGGTAC CCGGAGGGGT ATAGAAACGT AGCCTACGCC
ACGATCCACA GCGCCATTGG CGCCTGTTGC CAAGACCTGA GGTTTCCAGC TCTACGCCTG
GAGGAGCTCC CAAACGTCGT CTTCGAGGTA TCTGTCCTAA GCCCGCTTAG CCTCGTGACG
GAAGACCCGA GGAAATACCC AGAGGTGGTG CAGGTAGGCC GCCACGGCCT GGTGGTGAGG
CGCGGCCCCT ACTCCGGCCT CCTCCTCCCC CAGGTAGCCG TCGAAGAGTG CTGGGACCCT
GTAGAGTTCT TGATACACAC CTGCGTAAAG GCGTGGCTCC CCGGCGACTG TTGGCTAGAC
AAGAGGACGA GACTCTATGT CTACGAGGCC CAGATCTTCC GCGAGACGGC GCCAGGCGGC
GATGTGCAAG AGCGGGATCT TAAGGCGGAG GCCGCTAGAT GTAGTCCAAA AACTCGCCGA
TAA
 
Protein sequence
MAGALFKPYT IEEGAYLVKL ARRAVEIFLK TGRVVEPEGP PARLLLDNYG VFTTIETAGE 
RLELRGCIGY PEGYRNVAYA TIHSAIGACC QDLRFPALRL EELPNVVFEV SVLSPLSLVT
EDPRKYPEVV QVGRHGLVVR RGPYSGLLLP QVAVEECWDP VEFLIHTCVK AWLPGDCWLD
KRTRLYVYEA QIFRETAPGG DVQERDLKAE AARCSPKTRR