Gene Lcho_R0004 details

Gene Information

• Locus tag: Lcho_R0004
• ID: 6163549
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 326579
• End bp: 329462
• Gene Length: 2884 bp
• GC content: 52%
• IMG OID: 641663051
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 86
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GGTCAAGTGA ATAAGTGCAT GTGGTGGATG CCTTGGCGAT TACAGGCGAT GAAGGACGTG 
ATAGCCTGCG AAAAGCTTCG GGGAGCTGGC AAATTAGCTT TGATCCGGAG ATATCCGAAT 
GGGGAAACCC ACCCGCAAGG GTATCGCATG CTCAATACAT AGGCATGCGA GGCGAACCCG 
GCGAACTGAA ACATCTCAGT AGCTGGAGGA AAAGACATCA ACCGAGATTC CGAGAGTAGT 
GGCGAGCGAA ATCGGAAGAG CCTGCACGTT TTAGCAGTCG ACTTATCAGA ACGGAATGGA 
AAGTCCGGCC ACAGCGGGTG ATAGCCCCGT ATGGAAAAAG TTGACTGTGG AACTGGGCGT 
GCGACAAGTA GGGCGGGACA CGTGAAATCC TGTCTGAAGA TGGGGGGACC ATCCTCCAAG 
GCTAAATACT CGTAATCGAC CGATAGTGAA CAAGTACCGT GAGGGAAAGG CGAAAAGAAC 
CCCGGGAGGG GAGTGAAATA GATCCTGAAA CCGCATGCAT ACAAAAAGTA GGAGCCTCGC 
AAGGGGTGAC TGCGTACCTT TTGTATAATG GGTCAGCGAC TTACATTCAG TGGCAAGCTT 
AACCGTGTAG GGAAGGCGTA GGGAAACCGA GTCCGAATAG GGCGATTGAG TCGCTGGGTG 
TAGACCCGAA ACCAAGTGAT CTATCCATGG CCAGGATGAA GGTGCGGTAA CACGCACTGG 
AGGTCCGAAC CGACTAGTGT TGCAAAACTA GCGGATGAGC TGTGGATAGG GGTGAAAGGC 
TAAACAAACT TGGAAATAGC TGGTTCTCTC CGAAAACTAT TTAGGTAGTG CCTCAAGTAT 
TACCGTCGGG GGTAGAGCAC TGTTATGGCT AGGGGGTCAT GGCGACTTAC CAAACCATTG 
CAAACTCCGA ATACCGACGA GTACAGCTTG GGAGACAGAG CACCGGGTGC TAACGTCCGG 
ACTCAAGAGG GAAACAACCC AGACCGCCAG CTAAGGTCCC TAAGATTGGC TAAGTGGGAA 
ACGAAGTGGG AAGGCTAAAA CAGTCAGGAT GTTGGCTTAG AAGCAGCCAT CATTTAAAGA 
AAGCGTAATA GCTCACTGAT CGAGTCGTCC TGCGCGGAAG ATGTAACGGG GCTCAAGCCA 
GTCACCGAAG CTGCGGATTT GCAATTTATT GCAGATGGTA GGAGAGCGTT CTGTAAGCCT 
GTGAAGGGAG CTTGTGAAGG CTGCTGGAGG TATCAGAAGT GCGAATGCTG ACATGAGTAG 
CGTTAAAGGG GGTGAAAAGC CCCCTCGCCG TAAGCGCAAG GTTTCCTACG CAACGTTCAT 
CGGCGTAGGG TGAGTCGGCC CCTAAGGCGA GGCAGAGATG CGTAGCTGAT GGGAAACAGG 
TCAATATTCC TGTACCGATG TGTAGTGCGA TGTGGGGACG GAGAAGGTTA GCTCAGCCAA 
CTGTTGGATA TGTTGGTTCA AGCCTGTAGT CATGGCCCTT AGGCAAATCC GGGGGTCTTA 
GATGAGGGGT GATAAGGAGT CTGCTTGCAG ACGAACTGAG TGATACCCTG CTTCCAGGAA 
AAGCCACTAA GCTCCAGCTA CACACGACCG TACCGCAAAC CGACACTGGT GCGCGAGATG 
AGTATTCTCA GGCGCTTGAG AGAACTCTGG AGAAGGAACT CGGCAAATTG ACACCGTAAC 
TTCGGAAGAA GGTGTGCCTT TAGTAGGTGA ACCATTGACT TGGGGAGCCC AATGAGGTTG 
CAAAGAATCG GTGGCTGCAA CTGTTTAATA AAAACACAGC ACTCTGCAAA GACGAAAGTC 
GACGTATAGG GTGTGACGCC TGCCCGGTGC TGGAAGATTA AATGATGGGG TGCAAGCTCT 
TGACTGAAGT CCCAGTAAAC GGCGGCCGTA ACTATAACGG TCCTAAGGTA GCGAAATTCC 
TTGTCGGGTA AGTTCCGACC TGCACGAATG GCGTAATGAT GGCCACACTG TCTCCTCCAG 
AGACTCAGCG AAGTTGAAAT GTTTGTGATG ATGCAATCTC CCCGCGGAAA GACGGAAAGA 
CCCCATGAAC CTTTACTGTA GCTTTACATT GGACTTTGAA CAGATCTGTG TAGGATAGGT 
GGGAGGCTTT GAAACCTGGT CGCTAGATCA GGTGGAGCCA ACGTTGAAAT ACCACCCTGG 
TGTGTTTGAG GTTCTAACCT TGTCCCGTTA TCCGGGATGG GGACAGTGTA TGGTGGGCAG 
TTTGACTGGG GCGGTCTCCT CCCAAAGTGT AACGGAGGAG TTCGAAGGTA CGCTAAATAC 
GGTCGGAAAT CGTGTTGATA GTGCATTGGC ATAAGCGTGC TTGACTGCGA GACTGACAAG 
TCGAGCAGGT ACGAAAGTAG GACAAAGTGA TCCGGTGGTT CTGTATGGAA GGGCCATCGC 
TCAACGGATA AAAGGTACTC TGGGGATAAC AGGCTGATAC CGCCCAAGAG TTCATATCGA 
CGGCGGTGTT TGGCACCTCG ATGTCGGCTC ATCTCATCCT GGGGCTGTAG CCGGTCCCAA 
GGGTATGGCT GTTCGCCATT TAAAGAGGTA CGTGAGCTGG GTTTAAAACG TCGTGAGACA 
GTTTGGTCCC TATCTTCCGT GGGCGCTGCA GATTTGAGGA AGCCTGCTCC TAGTACGAGA 
GGACCGGAGT GGACGCACCT CTGGTGTACC GGTTGTCACG CCAGTGGCAT CGCCGGGTAG 
CTATGTGCGG AAGAGATAAC CGCTGAAAGC ATCTAAGCGG GAAACTCGTT TCAAGATGAG 
ATCTGCCGGG GCCTTGAGCC CCCTGAAGAG TCGTTCTAGA CCAGGACGTT GATAGGCTGG 
GTGTGGAAGC GCAGTAATGC GTTAAGCTAA CCAGTACTAA TTGCTCGTGA GGCTTGACCC 
TATA 

 

Protein sequence