| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4381 |
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| Symbol | |
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| ID | 6161034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4899782 |
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| End bp | 4901035 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641667158 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001793397 |
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| Protein GI | 171061048 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0231487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTT TGGATGATTT CCGCATGCAG ATGGGCCGCC ACGAGCTGGT GCCCATCATG
GTTGGTGGCA TGGGCGTGGA CATTTCCTCC GCCGATCTGG CGCTGGAAAC GGCTCGCCTG
GGGGGTGTCG GTCACATCTC CGACGCCATG ATCAAGACCG TGACGGACCG TCGCTACAAG
ACCAAGTACG TCAAGGCCAA GCAGGCGCTC TACAAGCTCA ACGTCGAGCT CGAGGACAAG
TCGGCCGTCA AGTTCAACCT CGGCCATCTG GCCGAGGCGA CCCGCCTGCA CGTCGAAGCC
ACCATGACGC GCAAGCAGGG CAGCGGCCTG GTGTTCATCA ACTGCATGGA AAAGCTGACG
ATGAACGCGC CGAAGGAGAC GCTCAAGGTG CGCATGAGCG CGGCCCTTGA CGCGGGCATC
GAAGGCATCA CGCTGGCTGC CGGCCTGCAC CTGGGTTCGT TCGCGCTGAT CGAGGACCAC
CCGCGTTTCC GCGATGCCAA GCTCGGCATC ATCGTGTCGT CGCTGCGCGC GCTGCAGCTG
TTCCTGAAGA AGAACGCGCG CCTGAACCGG CTGCCCGACT ACGTCGTGGT CGAAGGCCCG
CTGGCCGGCG GCCACCTCGG TTTCGGCATG GACTGGGCGC AGTACGACCT GGCCACCATC
GTGGCCGAGA TCATGCAGTG GATGAAGGCC GAGCAGCTCG ACATCCCCGT GATCCCCGCC
GGCGGCATCT TCACCGGCAC GGACGCCGTG CGCTTCATGG AGATGGGCGC GGCCGGCGTG
CAGGTGGCCA CCCGCTTCAC GGTCACCAAG GAATGCGGCC TGCCCGACGA CGTCAAGCAG
GAGTACTTCA AGGCCGACGA GGACGACATC GAGGTCAACC AGATCTCGCC CACCGGCTAC
CCGATGCGCA TGATCAAGTC GAGCCCGGGC ATCGGTGACG GCATCCGTCC GAACTGCGAG
GCCTACGGCT ACCTGCTCGA CGCCCAGGGC AAGTGTGCCT ACATCACCGC CTACAACCGC
GAGGTGGCCG CCAATCCCGA GGCGCGTCGC ATCAAGGTGA TGGACAAGAC CTGCCTGTGC
ACGCACATGC GCAACTTCGA CATCTGGACC TGCGGCCAGC TGACCTGGCG CCTCAAGGAC
ACCACGCTGC GCGACGCCGA AGGCCACTAC CAGCTGCTGA GCGCCGAACA CGTCTTCAAG
GACTACCAGT TCAGCTCCGA CAACCAGGTG CTGCTGCCCG CGCAGAACGC CTGA
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| Protein sequence | MKRLDDFRMQ MGRHELVPIM VGGMGVDISS ADLALETARL GGVGHISDAM IKTVTDRRYK
TKYVKAKQAL YKLNVELEDK SAVKFNLGHL AEATRLHVEA TMTRKQGSGL VFINCMEKLT
MNAPKETLKV RMSAALDAGI EGITLAAGLH LGSFALIEDH PRFRDAKLGI IVSSLRALQL
FLKKNARLNR LPDYVVVEGP LAGGHLGFGM DWAQYDLATI VAEIMQWMKA EQLDIPVIPA
GGIFTGTDAV RFMEMGAAGV QVATRFTVTK ECGLPDDVKQ EYFKADEDDI EVNQISPTGY
PMRMIKSSPG IGDGIRPNCE AYGYLLDAQG KCAYITAYNR EVAANPEARR IKVMDKTCLC
THMRNFDIWT CGQLTWRLKD TTLRDAEGHY QLLSAEHVFK DYQFSSDNQV LLPAQNA
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