| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4378 |
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| Symbol | |
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| ID | 6161031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4896304 |
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| End bp | 4896996 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641667155 |
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| Product | carboxymethylenebutenolidase |
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| Protein accession | YP_001793394 |
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| Protein GI | 171061045 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.112691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACCA CCGTCACCTT CCAGCGCCCC GACGGGCAAT CCGTGTCGGG TTATCTGGCC
GAACCCGCCC ACCTCGCCGG CGCGCCGGCG GTGGTGGTGA TCCAGGAGTG GTGGGGCCTG
AACGACCAGA TCCGCGGCGT CGCCGACCGG CTGGCACAGG CCGGCTACAT CGCGCTGGTG
CCCGACCTCT ACCGCGGCAA GTCGACCGTC GAGGCCGAGG AGGCGCATCA CCTGATGAGC
GGCCTGAACT TCGGCGACGC CGCCTCGCAG GACGTGCGCG GCGCGGTGCA GTACCTCAAG
GGCCGCGCGG TCAAGGTCGG CGTCACCGGC TTCTGCATGG GCGGCGCGCT GACGCTGCTG
GCCCTGGCCA ACGTGCCCGA GCTCGACGCC GGCGTGGTCT GGTACGGCTG CCCGCCGCTC
GAATACATCG ACGCCAGCAA GATCAAGGTG CCGGTGCAGG GCCACTGGGC CACGCAGGAC
CAGTTCTTCA AGATCGAGAC CGTCGACGCC CTGCAGGCCC AGCTGACCGA AGCCGGCGTC
AGCACCGACT TCCACCGCTA CCTGGCGCAC CACGCGTTCG CCAACGAGAC CGCGGTCGGC
CCCGGCCGCA TCCCCGCCAC GCAGTACGAC GCGGTGTGGG CGCAGCAGGC GTGGGATCGC
ACGCTGCGCT TCTTCGGCCG CACGCTGGGC TGA
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| Protein sequence | MGTTVTFQRP DGQSVSGYLA EPAHLAGAPA VVVIQEWWGL NDQIRGVADR LAQAGYIALV
PDLYRGKSTV EAEEAHHLMS GLNFGDAASQ DVRGAVQYLK GRAVKVGVTG FCMGGALTLL
ALANVPELDA GVVWYGCPPL EYIDASKIKV PVQGHWATQD QFFKIETVDA LQAQLTEAGV
STDFHRYLAH HAFANETAVG PGRIPATQYD AVWAQQAWDR TLRFFGRTLG
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