| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4373 |
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| Symbol | |
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| ID | 6161183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4891326 |
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| End bp | 4892645 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641667150 |
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| Product | ammonium transporter |
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| Protein accession | YP_001793389 |
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| Protein GI | 171061040 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.679539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTCC CCTCCGCCGC GACCCGCGGC TGCCTTGCCG CCTCGGCCTG GCTTTCCTGC
GCCAGCGCCG CCGCGCAGCC GGCCGCGCGG GGGCTGCAAT CGGCCGCCGT CATCGACAGC
GGCGACACCG CCTGGATGAT GGCCGCCACC GCGCTGGTGC TGCTGATGAG CATCCCGGGC
CTGGCGCTGT TCTATGCCGG CATGGTGCGC AAGAAGAACA TCCTGGCGAC GATGGCGCAG
GTGCTGGCGG TGTGTGCGCT GGTCAGCCTG CTGTGGTTTG CGCTCGGCTA CAGCCTGGCG
TTCCGGCCCG GCTCGCCGTG GCTGGGCGAC ACCGCCGGCG CCTGGCTGGC CACGCTGCAT
TTCGACCAGG CGCGCGGCCA GCTGAGCGTG CACCCGCTGG CGCCGACGGT GCCCGAGTCG
GTGTTCGTGA TGTACCAGAT GAGCTTCGCC ATCATCACGC CCGCCCTGAT CGTGGGCGCG
TTCGCCGAGC GCATGCGTTT TGCCGCCCTG TTGTGGTTCA TGGCGCTGTG GTCGCTGGCG
GTCTACGCGC CGATCGCGCA CTGGGTGTGG GCGCCGGGCG GCTGGCTGGG CGCGATCGGC
GCGCTCGACT TCGCCGGCGG CACCGTCGTG CACCTGAACG CCGGCATGGC CGGGCTGGTG
GCGGCCTGGA TGCTGGGCCG GCGCATCGGC TACGGCGAGC TGGCGCTGAC GCCGTCGAAC
CTGGGCTACA CGATGGTCGG CGCGGCGCTG CTGTGGGTCG GCTGGATGGG CTTCAACGGC
GGCTCGGCCT TTGCCGCCGA CGGCCGCGCC GGCATGGCGA TGCTGGCCAC CCAGCTCGCC
GCCGCCGCCG CCACGCTGAG CTGGATGCTG GCCGAGTGGC TGGTGCGCCG CACGCCCACG
CTGCTGGGCC TGTGCAGCGG CGCCGTGGCC GGCCTGGTGG CGGTCACGCC GGCTTCGGGT
TACGTGACAC CCGCCTCGGC GGTGCTGATC GGCGCGGCGG CCGGTGTCGG CTGCTACTGG
GGCGCGACCG GCCTCAAGCG CTGGCTCGGT GCCGACGACT CGCTCGACGT GTTCGGCGTG
CACGCCGTCG GTGGCCTGAT CGGCGCGCTG CTCACCGGCG TGCTGGCCGA CCCGCGCATC
GGCGGCGTGA CCGGCTCGCT GCAGGCGCAG GCGGTGGCTG CGGGCGCCAC GCTGCTCTAC
AGCGGCGTGG TCACGGCGGC GATCCTGTGG GCGGTCGACG CCGTGATCGG CCTGCGCGTC
ACGGCCCGCC AGGAACACGC CGGGCTCGAT CTCAGCCAGC ACGGCGAGCG GGTCGAATGA
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| Protein sequence | MRFPSAATRG CLAASAWLSC ASAAAQPAAR GLQSAAVIDS GDTAWMMAAT ALVLLMSIPG
LALFYAGMVR KKNILATMAQ VLAVCALVSL LWFALGYSLA FRPGSPWLGD TAGAWLATLH
FDQARGQLSV HPLAPTVPES VFVMYQMSFA IITPALIVGA FAERMRFAAL LWFMALWSLA
VYAPIAHWVW APGGWLGAIG ALDFAGGTVV HLNAGMAGLV AAWMLGRRIG YGELALTPSN
LGYTMVGAAL LWVGWMGFNG GSAFAADGRA GMAMLATQLA AAAATLSWML AEWLVRRTPT
LLGLCSGAVA GLVAVTPASG YVTPASAVLI GAAAGVGCYW GATGLKRWLG ADDSLDVFGV
HAVGGLIGAL LTGVLADPRI GGVTGSLQAQ AVAAGATLLY SGVVTAAILW AVDAVIGLRV
TARQEHAGLD LSQHGERVE
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