| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4369 |
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| Symbol | |
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| ID | 6161179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4886403 |
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| End bp | 4887158 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641667146 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001793385 |
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| Protein GI | 171061036 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.949414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAC AGAACCCCCA GAAGCCGATC GATCGCCTCC CGCCGAACGG CTTTCCGACC
GGTTTCCGGG CGCTGGTGAT CGGCGCATCC GGCGCGATCG GCGCGGCGAT GGTGGCGCAG
CTGCGCGCCG ATCCGGCCTG CTCGGCGGTG GTCGCGCTGC ACCGCCGGTC GCAGCCGGCG
ATCGATTTCG AGCGCGAGGA CAGCATCGCC GCAGCCGCCG CCGAGCTGGC CGCGCAGGCG
CCGTTCCACC TGATCGTCAA CGCCGCCGGC CTGCTGCACG CGGATGCCGG AAACGGCACG
GACGGCTTCA TGCCCGAGAA GAAGCTCGGC GACATCGAGA TGGCGCAGAT GCTCGACACC
TTCCGCGTCA ACACCTTCGG CCCGGCGCTG CTGCTGCGCC ACTTCAGCCG CCTGCTCGAC
CGCCAGCGCG GCGTGCTGGC GCTGCTGTCG GCCAAGGTCG GCAGCATCGA GGACAACCGG
CTCGGCGGCT GGTACAGCTA CCGCGCGTCG AAGGCGGCGC TCAACATGTT CATCAAGACG
GCCGCCATCG AGTTGAAGCG CAGCCAGCCG CAGGCGGTGG TGGTGGCGCT GCACCCGGGC
ACCGTGAACT CGCGGCTGTC GATGCCGTTT CGCGGCGCCG AGATCGGCCG CTCGCCCGAG
GTGGCTGCGG CCGAGATGCT GGCGGTGCTG GCCGGGCTGG CGCCGGGCGA CAGCGGGCAG
TTCGTGGCGT ATGACGGGCA GCGGCTGCCT TGGTAG
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| Protein sequence | MNTQNPQKPI DRLPPNGFPT GFRALVIGAS GAIGAAMVAQ LRADPACSAV VALHRRSQPA
IDFEREDSIA AAAAELAAQA PFHLIVNAAG LLHADAGNGT DGFMPEKKLG DIEMAQMLDT
FRVNTFGPAL LLRHFSRLLD RQRGVLALLS AKVGSIEDNR LGGWYSYRAS KAALNMFIKT
AAIELKRSQP QAVVVALHPG TVNSRLSMPF RGAEIGRSPE VAAAEMLAVL AGLAPGDSGQ
FVAYDGQRLP W
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