Gene Lcho_4367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4367 
Symbol 
ID6161139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp4885138 
End bp4885632 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content73% 
IMG OID641667144 
Productmethionine-R-sulfoxide reductase 
Protein accessionYP_001793383 
Protein GI171061034 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCC GCAACCTGAA CCAGCTGCTC GCCTCCTGGG GCCTGGGCGC AGGCCCTCGC 
GCCCGACCGG CCGCCGACGT GCCACCTGCA GTGCCGCGCG ACGACGCGCT GCTGCTGACC 
GACGCCCAAT GGCGCGAGCG CCTCGGCGCT GCGGCCTACG ACGTGCTGCG CCACGAAGGC 
ACCGAACACC CGTACACCAG CGCGCTGAAC GACGAAAAGC GCGCCGGCCG CTACCTCTGC 
GCCGGCTGCG GCCTGGCGCT GTTCGACGCC CGCGCCAAGT TCGACAGCGG CACCGGCTGG 
CCGAGCTTCT TCGCGGCCCT GCCCGGCGCG ATCGAGACCC GCGTCGACCA CCAATTGATC 
ATGCCGCGCA CCGAGTACCA CTGCGCCCGC TGCGGCGGCC ACCACGGCCA CGTCTTCAAC 
GACGGCCCGG CGCCCACCGG GCAGCGCCAT TGCAACAACG GCGTGGCGTT GAGGTTCGTG 
CCGGACGCGG ATTGA
 
Protein sequence
MTRRNLNQLL ASWGLGAGPR ARPAADVPPA VPRDDALLLT DAQWRERLGA AAYDVLRHEG 
TEHPYTSALN DEKRAGRYLC AGCGLALFDA RAKFDSGTGW PSFFAALPGA IETRVDHQLI 
MPRTEYHCAR CGGHHGHVFN DGPAPTGQRH CNNGVALRFV PDAD