| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4365 |
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| Symbol | |
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| ID | 6161137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4883128 |
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| End bp | 4884381 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641667142 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001793381 |
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| Protein GI | 171061032 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTTG TTTCGCTCGG CCTGTTGCCG GCTCTGGTCA GCGCCGCCCA GGCGCACGGC
CTCCTGCGGC CCACGCCGAT CCAGGCCGAG GCCATCCCCG CCATCCTGCG GGGTGTCGAC
GTGCTCGGCG CTGCCCGCAC CGGCTCGGGC AAGACGGCGG CCTTCGCCCT GCCGCTGCTG
CAGCGCCTGC AGCCCTGCCT GGGCGAGTGG CGGCGGCGCA CCCAGGCGCT GGTGCTGGTG
CCCACCCGCG AGCTGGCGCT GCAGGTCGGC GAGGTGCTGG AAGATCTTTC CAGCCACCTG
GTCGAGCCGC CGCGCATCGT GATCGCCTTC GGCGGCGTCT CGATCAACCC GCAGATGATG
GCGCTGCGCG GCGGCGCCGA GGTGGTGGTG GCCACGCCCG GGCGGCTGCT CGACCTGCTC
GGCCACAACG CGCTGCGCAT CGACACCCTC AACACCCTGG TGCTCGACGA GGCCGACCGC
CTGCTCGACC TCGGTTTTGC CGACGAGCTG GCGCGCATCC GCGCCCAGCT GCCGCCGCGC
CGCTTCCAGC ACCTGTTCTT CTCGGCCACC TTCCCCGAAG AAGTGCAGGC GCTGGCCGAC
GAGTGGCTGC ACGAGCCGGT GCGCATCGAG CTGCAGGCTG ACGCCGCCGA GACGCCCGAC
ATCACCCAGC GCGCCATCGA GGTCGACGCC ACCCGCCGCA CGCCGCTGCT GCGCAAGCTG
CTGGCCGAGC CGGGCTGGGA GCAGGCGCTG GTGTTCGTCG CCACCCGCTA CGCCACCGAG
CTGCTGGCGC ACAAGCTGCA CCGCAGCGGC ATCAAGGCCG CGGCGCTGCA CGGCGAGCTG
AGCCAGGGCG CGCGCAACGC CGCGCTGGCT GCCTTCCGCC AGCGCGAGCT GCAGGTGCTG
GTGGCCACCG ACGTGGCCGC GCGCGGCATC GACATCGCGC GCCTGCCGGT GGTCGTCAAC
TTCGACCTGC CACGCTCGAC CGACGACTAC ACCCACCGCA TCGGCCGCAC CGGCCGCGCC
GGCGAGGTCG GCCAGGCGGT CAGCTTCATC AGCGCCGACA CCGAGGCGCA TTTCCGCCTG
ATCGAGAAAC GCCAGCAGCA GCGCGTGCCA CGCGAGCAGA TCGCCGGTTT CGAGCCGGTC
GAGGTGGCCA CCGCCGAGCA GGCCGTCGGC GGCGTCAAGG GCACGCGGCC GAGCAAGAAG
GACAAGCTGC GCGCTGCTGC GGCCGCCGCG CAGGACCGGG CGCTGCGGCG CTGA
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| Protein sequence | MSFVSLGLLP ALVSAAQAHG LLRPTPIQAE AIPAILRGVD VLGAARTGSG KTAAFALPLL
QRLQPCLGEW RRRTQALVLV PTRELALQVG EVLEDLSSHL VEPPRIVIAF GGVSINPQMM
ALRGGAEVVV ATPGRLLDLL GHNALRIDTL NTLVLDEADR LLDLGFADEL ARIRAQLPPR
RFQHLFFSAT FPEEVQALAD EWLHEPVRIE LQADAAETPD ITQRAIEVDA TRRTPLLRKL
LAEPGWEQAL VFVATRYATE LLAHKLHRSG IKAAALHGEL SQGARNAALA AFRQRELQVL
VATDVAARGI DIARLPVVVN FDLPRSTDDY THRIGRTGRA GEVGQAVSFI SADTEAHFRL
IEKRQQQRVP REQIAGFEPV EVATAEQAVG GVKGTRPSKK DKLRAAAAAA QDRALRR
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