| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4360 |
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| Symbol | |
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| ID | 6160949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4879175 |
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| End bp | 4880344 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641667137 |
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| Product | DGPFAETKE family protein |
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| Protein accession | YP_001793376 |
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| Protein GI | 171061027 |
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| COG category | [F] Nucleotide transport and metabolism
[S] Function unknown |
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| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain
[COG3795] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAG CCCAGCCGCG GGTCCTGATC CTGCAACCGA AGGCCGACGA CGGCCCGTCC
TACCTCGCCA CCTGGCTGCA GGCGCGCGGT CTCGACTTCA CCGTGTGCAA CGTCGAGGCG
GGTGACGAGG TGCCGGTGGA TGCCGGCGCC TTCGACGCCA TCGCCATGCT CGGCGGCAGC
ATGAGCGCCA ACGACGACCT GCCGTTCCTG CACCGTGCCC ACGCGCTGCT GCGCGACGCC
GTGGCGCGCG ACGTGCCGGT GCTCGGCCAC TGCCTGGGCG GCCAGGTGCT GGCTCGCGCG
CTGGGTGCGG TCGTCACCGA CAACCCGGTG CCCGAGATCG GCTGGAGCGA GATCACGCGC
GCCGACCACC CGCTGGCGCG CGACTGGCTG GGCGATGTGT CCGAGCTGCC GGCCTGCCAG
TGGCATTTCC AGACCTTCGC ATTGCCCGAG GGCGCCACGC GGATCGCCGG CAACGCGGCC
TGCGCCAACC AGGCCTTCGC GATTGGCCCG CACCTGGGCA TGCAGTTCCA CATCGAGGTC
GATGCCGACA AGCTCGCGCT CTGGCGCAGC GAGCTGCCGG CGCCGGACTC GGCGCTGGCC
GCCCACGCCA GCGTGCAGGA CGCGGCCACG ATGGGCGCCG ACACCGCGCG CCTGCTGCCG
CACAGCCAGC GCATCGCCGC GGGCATCTAC GACCGCTGGC TGGCGCTGGC GGCGCAGCGC
CGGCGCTGCG CCCGCAAGGC CGGCGCGGCC ACTCGCCGAG CCCGGCAAAA GCGCCGGACA
ATCGTGCGCA TCCAGACCCG GAGCGCTGCC ATGTCCTACA TGCTGTTGAT CGTCGAGCCC
ACCGGCCAGC GCCAGGAGCG CGGCCGCGAA GGCGGCGAAG AGGCCTACGC GCAGATGCTG
CGCTACACCG AGGAACTGCA GGCGCGCGGC GTGCTGATCG CCAGCAACTC GCTCGCCTCG
CCGGCCCGCG GCGGCGTGCG GCTGCAGATG CGCGAGGGCC GGCGCACGCT GGTCGACGGC
CCGTTCGCCG AGGCCAAGGA AATGGTCGGC GGCTTCTTCC TGCTCGACGT GGCCACGCGT
GACGAGGCCA TCGCGCTGGC CGCCGAATGC CCGGCGGCGC AGTGGTGCAC GATCGAGATC
CGCCAGGTCG GGCCCTGTTA CGAGGGTTGA
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| Protein sequence | MSRAQPRVLI LQPKADDGPS YLATWLQARG LDFTVCNVEA GDEVPVDAGA FDAIAMLGGS
MSANDDLPFL HRAHALLRDA VARDVPVLGH CLGGQVLARA LGAVVTDNPV PEIGWSEITR
ADHPLARDWL GDVSELPACQ WHFQTFALPE GATRIAGNAA CANQAFAIGP HLGMQFHIEV
DADKLALWRS ELPAPDSALA AHASVQDAAT MGADTARLLP HSQRIAAGIY DRWLALAAQR
RRCARKAGAA TRRARQKRRT IVRIQTRSAA MSYMLLIVEP TGQRQERGRE GGEEAYAQML
RYTEELQARG VLIASNSLAS PARGGVRLQM REGRRTLVDG PFAEAKEMVG GFFLLDVATR
DEAIALAAEC PAAQWCTIEI RQVGPCYEG
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