| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4358 |
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| Symbol | |
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| ID | 6160947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4874421 |
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| End bp | 4877429 |
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| Gene Length | 3009 bp |
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| Protein Length | 1002 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641667135 |
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| Product | hypothetical protein |
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| Protein accession | YP_001793374 |
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| Protein GI | 171061025 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTGG GGGCTGCTGG CCAGCGCATC GTCGCGGCTG CGCTCGACCG CTTGCAGCGG
TCCGAGGTCG CAGACCTGCG GTTGACGGCC TTGGCGCTCG ACACCGCGCC GCCACCCGCG
CCCACCGCCG GGGAAACCGG CGCGTGGCCG CTGCAGCAGC TGCACCTGAG CGCCAGCGCG
GCCGAGCTGC TGGCCCTGCT GCGCACGCGC GCCGACCTGC GCGCCGCCTG GGAGGTGCCG
GGCTCGGCGC AGCCCTGGAC GCAGGCGCTG CAGTCGGTGC TGGCGGGCGA CGCGGGCGCC
GACACCTTCG GCCGTGCGCT GGCGCGCAGC CTGCTCGCGG CCCGCCACAG CCAGGTCCTG
ACCGCCCTGC TGCAGGCCCT GGCGGATGCC GGCGAGGCCG GGGTCGAGGC CTGCCACGTC
GTCGTCCAGC TCGGTGACAT CGGCGCCGCC GGGCTGCTGG TCGACGTGCT GGGCCTGCTG
CGGCTGCACC TGCCACCGGG CACGCCGATC CACCTGCATG CGCAACTGCC CGAGCCCGAC
ACGGCCGGCG AGCGGCCGCT GCCGGCCGCC GAGGCGCTGG CCTGGGTGCA GCTGCAGGAG
CTCGACGCCC TGGCGCGTGG CCAGGGCTGG CCCGAGCGGC TGGCCGGCGG CGAAGCCGCG
GCGGCGCTGG CCGACGTGCC GGCCTTCGAG CACGGCTGGC TGTCGGGCGC GATCGACGAA
GACGGCCTGC AGCAGCTCGA CGCCACCCGG CGCGCCGCCC ACGCCGCCGG CCTGCTGCAG
CTGCTGATCG AACAGCCCGG CCTGGTCGAC AGCTTGCGCG CCAGCCCGCC GGGCAGCAGC
CGTTTCCAGG CCTGGGGCCA GGCGCAGCTG CGCTGCAACG CCCAGGCCAT CCGCGCCCAC
CTGACGCAGG AGCTGCTGCT GCGCCTGCTC AGCCAGCTGC GCCATGACCA CTGGCGGCCC
GCGCTCGGCT ACGTCAGCAG CCCGTCGTCG GCCGAGGCGG TGCAGCTGCT CGGCGACTCG
CTGCTCGAGG CCTGGGGTGT CTCGCCGGCG CATCTGGGCC TGCAGCTCGG CCTGCCCGAA
GTCGGCGAGG CCGACCAGCC GCCCGAGGCC GTCGAGCAGG AATGGCAGGC GCTGATGCAG
CACGCCCTCG GCCTGCTCGA CATGGTGCCG CCGGCCGGCC AGGCCGAGGA GCTGCGCCGG
CTGATGCAGG AGGCGCATGA CGAACGCTTC CGCGCGGTCG GCGTGCGGGC TGCCTTCGAT
CAGCCCGAGC ACCAGCTGCG CAAACGCGCC GTGGCGGTGC GCCAGCGCAT CGAGACCGCC
TTGTGGACCG ACTGGCGCGA GGGCCGCCGA TCGCTCAACG GCTGCGGCCA GCTGCTCGCC
GCCGCCGTCA GCCACGTGGC ACGGCACGCC GAGGTCATCG ACCGCCAGCG GCTCGAACGC
GAAGCCCAGG CGCTGCACCT GACGCAGCTG GCCGAGGCGC GCCTGGCCGA ATCGGCCGGC
AGCCGGCGTG CTCGCTGGTC GCCGTTCGGT GCCCGGAGCG AAGACCTGGG CCCGCTGGCC
CAGCTGCTGC GCGACGCCGG GCTGGCCCGC ACCCGGGCCA CGCAGGCGGC GCTGGCGATG
CGCTACGGCG CGCTGCTGCT CGATCAGCTG ACGGTGCTGC AGGGCATGGT CGACGCCGCC
GAGCTGTCGT TGGGCGCCAT GACGCAGACC GCCGACCACG CCGCCGCCGC CGCGTTGCCG
CCGAGCGAGC CGGCCGACGG CGCCGCTGAC GCGCTGATCG GCGAGCGCCT CGAATCGCGC
CAGCTGATGG CCGACGCCCG CAGCCGGCTG GTGACCGGCG AGGCGGTGCA GCGCGCCCAC
GTGGCCGCGC TGCGCTCGGC CGCATTCAAG CGCTGGGGCG ACCGGCCGAG CTTCCGGGCG
CTGGCCCAGT GGCTCGACGA GGACGCCAGC CCGGCGGCGC TGCTCGGCCT GTGCGAAGCG
CGCCTGCCGG TGTCGGCGGT GCAGTACGTG GTCGACGACG CCTGGGCGGG CCTGGGCCTG
GCCTGGCTGG CCGACGCCGA CGGCCGCGAC CGCAACCTGG CCGCCTTGCA GCGCCGCGCG
GTCATCGGCC TGGCGCCTGC CGCCGACACC GCCGAGGCGT TGCCGGCAGC CCGCACCGGC
TGGTTCGTGC CCAATCGCCT GGCCGAATGC CTGGGCCACG CCCCGGAGCC GGAGCCCGCC
GAGGCCCTGG TCGACCGGCC CGCCGAAGAA CGCGTCGAGG CAGGCGCCGA AGCGACGGCT
GACGCGGCCT CGGACGCCGC TGCCGGTGCG CCGACCCCAT CTGTCGGGCC CGACGCTGCC
CTGCCGCCGG CCCCGCCCGT GCCGCTGGCG CAGCGCCTGC GCGAGATCTG GCCCGCCAGC
GCCGACGTGC TGCTCGTCAG CGCCTACCCG GCACTGGCGG TGGTGCGGGT CCAGGCGGCG
GCCACGCCGC TGTCGTGGCG GCGCGTGCAG GAGCTGGCGA CCTTGCACCA GGCCTGGCGG
CGGCGCCACG GCAGCGCCGC GCGCGGCCTG CAGCTCGACG CCTGGCGCAG CCGGTCGGGC
CCGGCCGACC GCGTGGCGCA TGACCCCGGC GAGGTGCAGG CGGTGCTGCT GCTGGCCGAT
GCGCTGGGCC TGCTTGAAGA AACCCCGGCC GCCACGCTGG TCCAGCCCGA GGGCCTGCGC
CTGACCCATG TCCGGCGCGA TGCCGACGGC TTCGAGTTCG AGCGCATGGC GCTCGGCAGC
GGCCTGGTCG ACGCCGCCAA CCGGCATGGC GCCGAGGTGC TCGGCACCCT GTACGACGAC
GTGCTCGACC GGATCCTGGC CAGCGCCGCC GAAGCCGGCA CCGCCGAGCG CATCCGGCAG
GCCATGCAGA GCCGCATCGA CGGGCTCGCC GGCGGCTGGC CGCCCGAACA GCGCGACGAA
CGATCGCGGG CCTGGCACGT GGCCGCCCGC ACCGCCATGA AGATCCTCCG ACAGGACACC
CACACATGA
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| Protein sequence | MGLGAAGQRI VAAALDRLQR SEVADLRLTA LALDTAPPPA PTAGETGAWP LQQLHLSASA
AELLALLRTR ADLRAAWEVP GSAQPWTQAL QSVLAGDAGA DTFGRALARS LLAARHSQVL
TALLQALADA GEAGVEACHV VVQLGDIGAA GLLVDVLGLL RLHLPPGTPI HLHAQLPEPD
TAGERPLPAA EALAWVQLQE LDALARGQGW PERLAGGEAA AALADVPAFE HGWLSGAIDE
DGLQQLDATR RAAHAAGLLQ LLIEQPGLVD SLRASPPGSS RFQAWGQAQL RCNAQAIRAH
LTQELLLRLL SQLRHDHWRP ALGYVSSPSS AEAVQLLGDS LLEAWGVSPA HLGLQLGLPE
VGEADQPPEA VEQEWQALMQ HALGLLDMVP PAGQAEELRR LMQEAHDERF RAVGVRAAFD
QPEHQLRKRA VAVRQRIETA LWTDWREGRR SLNGCGQLLA AAVSHVARHA EVIDRQRLER
EAQALHLTQL AEARLAESAG SRRARWSPFG ARSEDLGPLA QLLRDAGLAR TRATQAALAM
RYGALLLDQL TVLQGMVDAA ELSLGAMTQT ADHAAAAALP PSEPADGAAD ALIGERLESR
QLMADARSRL VTGEAVQRAH VAALRSAAFK RWGDRPSFRA LAQWLDEDAS PAALLGLCEA
RLPVSAVQYV VDDAWAGLGL AWLADADGRD RNLAALQRRA VIGLAPAADT AEALPAARTG
WFVPNRLAEC LGHAPEPEPA EALVDRPAEE RVEAGAEATA DAASDAAAGA PTPSVGPDAA
LPPAPPVPLA QRLREIWPAS ADVLLVSAYP ALAVVRVQAA ATPLSWRRVQ ELATLHQAWR
RRHGSAARGL QLDAWRSRSG PADRVAHDPG EVQAVLLLAD ALGLLEETPA ATLVQPEGLR
LTHVRRDADG FEFERMALGS GLVDAANRHG AEVLGTLYDD VLDRILASAA EAGTAERIRQ
AMQSRIDGLA GGWPPEQRDE RSRAWHVAAR TAMKILRQDT HT
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