Gene Lcho_4352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4352 
Symbol 
ID6163966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp4867598 
End bp4868077 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content65% 
IMG OID641667129 
Producthypothetical protein 
Protein accessionYP_001793368 
Protein GI171061019 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT CCATCAAGCT CGAAGTCGAA GAAGCCCGCC ACATGATTGC CGCCGCGGTG 
CGCAAGGCGG CCGAGATCGG CGTCCTCGAA ACCGTCTGCA TCGTCGATGA CGGCGGCTAT 
CCGATCGTGA TGGAGCGCAT GAACGGCGCG CGCATCACCG GCCCGCAGAT CGCCTGGAAC 
AAGGCCTTCA CGGCCGCCGG CCACAAGCGC TCGACGCACC TGTTCAATCA GGCTCCGAAT 
GGTCCGGCAT TGCCCGGCAA TGAGGCCTTC GGCATCCAAT TGAGCTTCGA GGGCCGCTTC 
GCGATCTTCG TCGGCGGCTT TCCGATCGTC GTCAATGGCG AGGTGATCGG CGGCGTCGGC 
CTGAGCGGCG GCAATGGCGA GCAGGATACC GCCTGCGGCG TGGCCGCCTT GCAGGCCCTG 
GCCGAGCTGC TGCCGCAGCC CGACTACAGC GTGCTGGTGC AGGCCGACAT CAAGAAGTAA
 
Protein sequence
MKKSIKLEVE EARHMIAAAV RKAAEIGVLE TVCIVDDGGY PIVMERMNGA RITGPQIAWN 
KAFTAAGHKR STHLFNQAPN GPALPGNEAF GIQLSFEGRF AIFVGGFPIV VNGEVIGGVG 
LSGGNGEQDT ACGVAALQAL AELLPQPDYS VLVQADIKK