Gene Lcho_4346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4346 
Symbol 
ID6164044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp4863125 
End bp4863880 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content73% 
IMG OID641667123 
Producthypothetical protein 
Protein accessionYP_001793362 
Protein GI171061013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGATC TGCTCGCCCT GCTGCCCCCG GGCGTCGACG CCGGCCTCTA CCTGGGCATG 
GCGGTGACGG TGTTCCTGGG CGCCTGCCTG CAGGGCATCG GCGGGGTCGG CTTCGCGATG 
TTCTCGGCGC CGCTGGCCGC GCTGCTGTTT CCGGCGCTGG TGCCCGGGCC GCTGCTGGCG 
CTGGGCTGCC CGCTGGCGCT GATGACCTGC ATCCGCGAGT TCCGCGCCAT CGAGTGGCCG 
ACCGCCGCCG CGGCGCTGGT CGGGCGCGTG ATCGGCACCG GGCTGGCCGG GCTGATCCTG 
ACGCTGCTGT CGGCGCAGGT GCTGTCGGTG CTGTTCGCGC TGCTGATCCT CACCGGCGTG 
GCGCTCAGCC TGGCGGGCTG GCGGGTGGCG GCCACGCGCA CCCGCATCGG CATCGCCGGG 
CTGGCGTCGG GCGTGATGGG CACCATCACC TCGGCCGGCG CGCCGCCGTT CGCGATCGCG 
ATGCAGCACA TGCCGCCCGA CCGGCTGCGT GCCACACTGG GCTGCGTCTT CTTCGTCGGC 
TCGGCGCTGT CGCTGCTGAT GCTGGCGGCG GTGGGCCGCT TCGACGGCTC GCACCTCTAC 
CTGAGCGTGC TGCTTCTTCC CTGGATCGTG CTGGGCTTCT GGGCCTCCAG TCCGCTGAAC 
CGGCGTTTCT CCCGCAAGGC GGTGAGGGCG CTGCTGCTGG GCCTGGCCAC GGCCGGCGCG 
CTGGGTGTCC TTTTCAGAAC ATGGATCACG CCATGA
 
Protein sequence
MTDLLALLPP GVDAGLYLGM AVTVFLGACL QGIGGVGFAM FSAPLAALLF PALVPGPLLA 
LGCPLALMTC IREFRAIEWP TAAAALVGRV IGTGLAGLIL TLLSAQVLSV LFALLILTGV 
ALSLAGWRVA ATRTRIGIAG LASGVMGTIT SAGAPPFAIA MQHMPPDRLR ATLGCVFFVG 
SALSLLMLAA VGRFDGSHLY LSVLLLPWIV LGFWASSPLN RRFSRKAVRA LLLGLATAGA 
LGVLFRTWIT P