| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4345 |
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| Symbol | |
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| ID | 6164043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4862400 |
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| End bp | 4863128 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641667122 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001793361 |
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| Protein GI | 171061012 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCC TCGTCACTCC CGCCTTTCAC GCCGATCTGT CGCCCACGCT CGGCGACCGC
CATGCCTCGC TGGTGTCGGT GATCGTGCAC AACCTGCGCC AGCAGATCCT CGACGGCACG
CGCCACCAGG GCGACCGGCT GGTCGAGGGC AAGCTGTCGG CCGAGCTGGG CGTCTCGCGC
GTGCCGGTGC GCGAGGCGCT GCGCCAGCTC GCCTCCGAAG GCCTGGTCGA CATCGAGCCG
CGCCGCGGCG CCAGCGTCAC CCGCATCTCC GACGACATCG CCGTCGAGCT GATCGAGGTG
CGCGCCACGC TCGAGGGCCT GAACGCCAAG CTGGCCGCGC AGCGCCGCGA TCCGGACAAG
CTGCCGCAGC TGTACGCACT GATCGCCACC GGCGACCGGG CCGCACAGGC CGAGGACGTC
GACGCGCTGG CCGCCATCAA CGCCCGGGCC CACGAGCTGA TCGCCACGGT GGCCGAGAAC
CGCGTGCTGC AGGACCTGAT GCGCTCGCTG CGCGACCGCA CCGCGCTGCT GTTCGCGCCC
TACCGCAAGC TGCGCGCGCG CCCGCTGTGG ATCGAGCACG CGCAGATCCT GCAGGCGGTG
ATCGACGGCG ATGCCGACCT CGCCGGCCTG CTGGCCACGC GGCACGTCTA CAGCGCCGCC
CGGACCTACC TCGATGCCCG CGGTGCCTCG CACGGCGACC ACGCGGGCCA CGCCGCCACC
GGCTCCTGA
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| Protein sequence | MMTLVTPAFH ADLSPTLGDR HASLVSVIVH NLRQQILDGT RHQGDRLVEG KLSAELGVSR
VPVREALRQL ASEGLVDIEP RRGASVTRIS DDIAVELIEV RATLEGLNAK LAAQRRDPDK
LPQLYALIAT GDRAAQAEDV DALAAINARA HELIATVAEN RVLQDLMRSL RDRTALLFAP
YRKLRARPLW IEHAQILQAV IDGDADLAGL LATRHVYSAA RTYLDARGAS HGDHAGHAAT
GS
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