| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4342 |
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| Symbol | |
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| ID | 6164040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4859783 |
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| End bp | 4860607 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641667119 |
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| Product | hypothetical protein |
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| Protein accession | YP_001793358 |
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| Protein GI | 171061009 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0730] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCG TCGACCTGCT GCCCTGGATC GGGGCCTATC TGGCGCTGGG TTGTGTCGGC
GGCTTCGCGG CCGGCCTGCT CGGCATCGGC GGGGGCATGC TCTACGTGCC GCTGCTGGCG
TGGCTGTTCG AACTGCAGCA TTTCGCGCCC GCGTCGATGC TGCATCTGGC GCTCGGCACC
TCGCTGACCA CCATCATCTT CACGTCGATC TCGAGCCTGC GCGCGCACCA CGCCAAGGGC
AACGTCGACT GGACGATCGT GCGCCAGATC GTGCCGGGCA TCGCCATCGG CGGGCTGATC
GGCGGCGCGC TCGCCAAGCA GCTGCCGACC GCGACGCTGG CGCTGATCTT CGCGGTCTTC
GTGTCGTACT CGGCCACCCA GATGTTCCTC AACGCCAAGC CCAAGCCCAG CCGCAGCCTG
CCCGGCGCGG CGGGCGTGGC CGGCGTCGGC GTGCTGATCA GCACGCTGTC GCAGCTGGTG
GGCGCAGGCG GCGGCTTCCT GAGCGTGCCG TTCATGACCT GGTGCAACGT CACGATCCAC
CGCGCGGTGG GCACCTCGGC GGCGATCGGC CTGCCGATCG CGATCGTCGG CACCGTCGTC
TACTTCCTCG GCGGCCAGAG CAGCACCGGC CTGCCGCCGG GCAGCTTCGG CTACATCTAC
CTGCCCGCGC TGCTGGCGGT GCTGGTGCCC AGCGTGCTGA TGGCGCCGGT GGGCGCGCGG
CTGGCGTCGA CGCTGCCGGT GGCCACGCTC AAGCGGGTGT TCGCGGGTTT CCTGTTCGTG
CTGGCGCTGA AGATGCTGCA CTCGGCCGTC AAGGCCTGGG GCTGA
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| Protein sequence | MNLVDLLPWI GAYLALGCVG GFAAGLLGIG GGMLYVPLLA WLFELQHFAP ASMLHLALGT
SLTTIIFTSI SSLRAHHAKG NVDWTIVRQI VPGIAIGGLI GGALAKQLPT ATLALIFAVF
VSYSATQMFL NAKPKPSRSL PGAAGVAGVG VLISTLSQLV GAGGGFLSVP FMTWCNVTIH
RAVGTSAAIG LPIAIVGTVV YFLGGQSSTG LPPGSFGYIY LPALLAVLVP SVLMAPVGAR
LASTLPVATL KRVFAGFLFV LALKMLHSAV KAWG
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