| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4338 |
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| Symbol | |
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| ID | 6164004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4853580 |
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| End bp | 4854950 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641667115 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001793354 |
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| Protein GI | 171061005 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG CCACCCCCGA AGCCGCCGCC ATCCGCGTCA TCTACGTCGA GGACGACGAG
GACGTGCGCG CCGGCAGCGC CCAGGCACTC GAACTCGCCG GCCTGGCGGT CGACGCCTTC
GGCTCGGTCG AGGCGGCGCG TGCACGCATC CGCGCCGGCG TGCCGGCGGT GGTGCTGAGC
GACGTGCAGC TGCCCGGCAG CAGCGGCACC GAGTGGCTCG ATCAGATCCG CGCCATCGAC
GCCGAGCTGC CGGTGATCCT GGTCACCGGC CACGGCGACA TCGCGATGGC GGTGCAGGCG
ATGCGGCGCG GCGCCTACGA CTTCATCGCC AAACCGTATT CGTCCGACCA GCTGGTGACG
GTGGTGCGGC GCGCCGCCGA AAAACGCCGC CTGACGCTGC AGGTGCAGGC GCTGCGCGAC
GAGATGGACA CCTGGCACGG CATCCAGGCG CTGCTGCTGG GCCGCTCGGC GCAGATGCAG
AAGGTGCGGC GCACGGTGAT GAACCTGGCC TCGACCTCGG CCGACGTGGT GATCTACGGC
GAAACCGGCA CCGGCAAGGA CCTGGTGGCA CGCTGCCTGC ACGACCACAG CGACCGCCGC
CGCGCCCACT ACGTGCCGCT CAACTGCGGC GGCCTGCCCG AGGCGCTGGC CGAGAGCGAG
CTGTTCGGCC ACGAGGTCGG CTCGTTCACC GGCGCCACCC GCCAGCGCAT CGGCAAGTTC
GAACATGCGC ACGGCGGCAC GCTGTTCCTC GACGAGATCG AGAGCATGCC GATGGCCGTG
CAGATCAAGC TGCTGCGCGC GCTGCAGGAG CGCAGCATCG AGCGAGTGGG TTCGAACACG
CCGGTGGCGG TGAACTGCCG CGTGATCGCC GCGGCCAAGC AGGATCTGAA ACGCTTGAGT
GATCAGCAGA AGTTCCGCGC CGACCTCTAC TACCGCATCG GCGTGGCCTT CATCGAGCTG
CCGCCGCTGC GCGAGCGGCG CGAGGACATC CCGCTGCTGT TCGAACATTT CACGCTGCAG
GCCGCCGGGC GCTACCAGCG CAGCGCGCCT TCCCTCAGCG GCGCACAGCT GGCCGAACTG
ATGGCGCACC CCTGGCCCGG CAACGTGCGC GAGCTGCACA ACGTGGCCGA TCGCTTCGTG
CTCGGCCTGC TCGGCGAGCG TCTCGAACTG GCCGCGCAGG ACCAGGCCCA GCCGAGCAAG
CTGCCCGAGC AGATCGAGCA GTTCGAGCGC GTCATGATCA GCGAGGCGCT CAAGCGCCAA
CACGGCGACG TGGCACTCGC CGCCAAGGCG CTCGGCCTGC CCAAGCAGAC GCTCTACGAC
AAGCTGCGCC GGCTGCGCAT CAGCACCGAC AGCTTCAAGC CGGAAGGCTG A
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| Protein sequence | MSEATPEAAA IRVIYVEDDE DVRAGSAQAL ELAGLAVDAF GSVEAARARI RAGVPAVVLS
DVQLPGSSGT EWLDQIRAID AELPVILVTG HGDIAMAVQA MRRGAYDFIA KPYSSDQLVT
VVRRAAEKRR LTLQVQALRD EMDTWHGIQA LLLGRSAQMQ KVRRTVMNLA STSADVVIYG
ETGTGKDLVA RCLHDHSDRR RAHYVPLNCG GLPEALAESE LFGHEVGSFT GATRQRIGKF
EHAHGGTLFL DEIESMPMAV QIKLLRALQE RSIERVGSNT PVAVNCRVIA AAKQDLKRLS
DQQKFRADLY YRIGVAFIEL PPLRERREDI PLLFEHFTLQ AAGRYQRSAP SLSGAQLAEL
MAHPWPGNVR ELHNVADRFV LGLLGERLEL AAQDQAQPSK LPEQIEQFER VMISEALKRQ
HGDVALAAKA LGLPKQTLYD KLRRLRISTD SFKPEG
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