| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4323 |
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| Symbol | |
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| ID | 6161201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4836957 |
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| End bp | 4837895 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641667100 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001793339 |
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| Protein GI | 171060990 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.911681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC AGCTGAACAC CCCGATGGAC ACGGCCTTGT CGCGCCAGAC GATGGCGCGC
GAACGCCAGC GCCGTGCGGC CTGGAAGCGC CACGTCACGC CCGCCCGGCT CGGCATCTAT
GGCTTCCTGA TCATGGCGGC GGTCTTCTTC CTGCTGCCGC TCTACGTGAT GATCGTCACC
TCGCTCAAGC CCATGAGCGA GATCCGGCTC GGCGACATCT TCGCGCTGCC GCAGACGCCC
AGCGTCGAGG CCTGGGCGAT CGCCTGGTCG AGCGCCTGCA CCGGCCTCAA CTGCGAAGGC
ATCAGCGTCG GCTTCTGGAA CTCGATGCGC ATCGTCGTGC CGAGCACGGT GCTGTCGATC
TTCGTCGGCG CGGTCAACGG CTACGCGCTG TCGTTCTGGC GCGTGAAGTG GGCCGGTGCG
CTGTTCGGCG TGCTGATGCT GGGCACCTTC GTGCCGTATC AGGTGGTGAT CTTTCCGCTG
GTCAAGGCGC TCGCCGCGCT GGGCCTGTTC GGCAGCCTGG CGGGCATCGT GCTGATCCAC
ACCATCTTCG GCATGCCGGT GATGACGCTG CTGTTTCGCA ACTACTACGC CAGCGTGCCC
GAGGAGCTGT TCAAGGCCGC GCGCATCGAC GGCGGCGGCT TCTGGCGCAT CTTCCTGCAG
CTGATGCTGC CGATGTCGCT GCCCATCATC GTGGTGGCGG TGATCCTGCA GGTCACGGGC
ATCTGGAACG ACTTCATCCT CGGCCTGGTG TTCGCCGGCC GCGAGAACCT GCCGATGACG
GTGCAGCTCA ACAACATCAT CAACAGCACC CAGGGCGAGC GCGCCTACAA CGTCAACATG
GCCGCGACCA TCCTGACGTC GATGGTGCCG CTGGTGATCT ACCTGGTGTC GGGCCGCTGG
TTCGTGCGCG GCATCGCCGC CGGCGCGGTC AAGGGCTGA
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| Protein sequence | MSAQLNTPMD TALSRQTMAR ERQRRAAWKR HVTPARLGIY GFLIMAAVFF LLPLYVMIVT
SLKPMSEIRL GDIFALPQTP SVEAWAIAWS SACTGLNCEG ISVGFWNSMR IVVPSTVLSI
FVGAVNGYAL SFWRVKWAGA LFGVLMLGTF VPYQVVIFPL VKALAALGLF GSLAGIVLIH
TIFGMPVMTL LFRNYYASVP EELFKAARID GGGFWRIFLQ LMLPMSLPII VVAVILQVTG
IWNDFILGLV FAGRENLPMT VQLNNIINST QGERAYNVNM AATILTSMVP LVIYLVSGRW
FVRGIAAGAV KG
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