Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4322 |
Symbol | |
ID | 6161200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4836046 |
End bp | 4836960 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641667099 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001793338 |
Protein GI | 171060989 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.709279 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCAGA TCCATTCCAA TCCCAAGCGC AGGCGCAGCC GCCGCAGCTG GGCCGCCTCG ATCGCGCTGA TCCCGATGGC TCTCACCGTC GTGCTGGCCT ATGTCGGCAC GGTGCTGTGG TCGGTGCGGG TGTCGTTCAG CAGCGCCAAG ACCTTTGCGC GCGACGACTT CGTCGGCTTC GCGCAATACG AGCGCCTGTT CAACACCGAC CGCTGGATCG TCTCGCTGCA CAACGTGGCG CTGTTCGGCG TGCTGTTCGT GAGCTGCTGT CTCGTGATCG GCTTCCTGCT GGCGGTGTTC ATCGACCAGC GGGTACGGCT CGAAGGCGTG TTCCGCACCA TCTTCCTGTA CCCGTACGCG ATGTCCTTCG TGGCCACCGG GCTGATCTGG CAGTGGATGC TCAACCCGCA GCTGGGCATC CAGGCCAGCG TGCGGTTGAT GGGTTTCGAG AGCTTCACCT TCGACTGGAT CGTCACGCAG GACAAGGTCA TGTACTGCAT CGTGCTGGCC GCCGTCTGGC AGGCCAGCGG GCTGGTGATG GCGATCCTGC TGGCGGGCCT GCGCGGCGTC GACGAAGAGC TCTGGAAGGC CGCCCGCATC GAGGGTGTGC CGCGTTGGCG CTACTACGCC AACATCGTGC TGCCGCAGCT CGCGCCCTCG GTGGGCACGG CCTTCGTGCT GCTGTCGGTG GCGGTGGTGA AGGTCTATGA CGCAGTGGTC GCGATGACGC AGGGCGGCCC TGGCGACGCC AGCGAAGTGC CGGCCAAGTT CATCATGGAC CACCTCTTCA ACCGCGCCAA CATCGGCCTG GCCTCGGCCG CATCGACCGT GATGCTGCTG ACCGTTCTGG CCCTGCTGGC GCCCTGGTGG TATGCCCGCT CGCACGCCGC GCGCAATGCC GGGAGAGCCG CATGA
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Protein sequence | MAQIHSNPKR RRSRRSWAAS IALIPMALTV VLAYVGTVLW SVRVSFSSAK TFARDDFVGF AQYERLFNTD RWIVSLHNVA LFGVLFVSCC LVIGFLLAVF IDQRVRLEGV FRTIFLYPYA MSFVATGLIW QWMLNPQLGI QASVRLMGFE SFTFDWIVTQ DKVMYCIVLA AVWQASGLVM AILLAGLRGV DEELWKAARI EGVPRWRYYA NIVLPQLAPS VGTAFVLLSV AVVKVYDAVV AMTQGGPGDA SEVPAKFIMD HLFNRANIGL ASAASTVMLL TVLALLAPWW YARSHAARNA GRAA
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