| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4319 |
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| Symbol | |
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| ID | 6163102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4832077 |
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| End bp | 4833171 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641667096 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001793335 |
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| Protein GI | 171060986 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.34288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACACG AGACACGACG GCCAGACCAA GCGGTGAAAC AGCCGGCGAC CGGCGGCGGC
GTGGTGTTCG ACCGCGTCAG CAAACGCTAC GGCGACTTCA CCGCGGTCAA CGAGGTCTCG
TTCACCATCG CACCCGGCGA ACTCGTCACG CTGCTCGGCC CCTCGGGCTG CGGCAAGACC
ACCACCTTGC GCATGGTGGC GGGGCTGGAG GCGGTGTCGG GAGGAAGCAT CCGCATCGGC
GGCGTCGACG TGACGAACCG CGCCGCCAAC GAGCGCGACG TCAGCATGGT GTTCCAGTCC
TACGCGCTGT TCCCGCACAT GAACGTGCTC GAGAACGTCT GCTACGGCCC GATCTCCGGT
GGCGCACACA AGGCCCGAGC GCGCGAACTG GCGCGCGACA AGCTCAGGAT GCTCGGCCTC
GGCGAGCTCG AACAGCGCCT GCCATCGGAG TTGTCCGGCG GCCAGCAGCA GCGCGTGGCG
GTGGCGCGCT CATTGGTGCT CGAACCCGCG GTGCTGCTGT TCGACGAGCC GCTGTCCAAC
CTCGACGCCA AGCTGCGCCG GCGCGTGCGG CAGGAGATCC GCGAGCTCCA GCAATCGCTC
GCGCTGACGG TGCTCTACGT CACGCACGAC CAGAGCGAGG CGCTGGCGGT GTCCGACCGA
GTGATCGTGA TGGACGGCGG GCGCATCGCC CAGCAGGGCA CGCCGCACGA GCTGTACGAG
GCACCGGCCA GCCGCTTCCT GGCCGACTTC ATCGGCGATG CCAACCTGGT CGACGGCCGC
GTCATCTCGG CCGGATCTGG CGCGCGGTTC GAGGCCGGCG CCGTCGCCGT GCCAGTGGGC
GTCGGTGGCC TGCGAGCGGG CCCCGCCACG CTGGCCTTGC GGCCACATCG GCTGCGCATC
GTGGCGGCCG GACAAGGCCT GTTCGACGGC CAGTGCCGGC GCGCCGATTA CCTGGGCAGC
CACATCGAAT ACCTGTTCAC TTCGCCGTGG GGTGAACTGC TGGTGTTCGG TCCTGCCGAC
GGGCCGACCT GCCGGCGCGG CGAGTCGGTC GGCATCGACT TCGACGCCGA TCACGCCATC
GTTCTGCCGC GCTGA
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| Protein sequence | MPHETRRPDQ AVKQPATGGG VVFDRVSKRY GDFTAVNEVS FTIAPGELVT LLGPSGCGKT
TTLRMVAGLE AVSGGSIRIG GVDVTNRAAN ERDVSMVFQS YALFPHMNVL ENVCYGPISG
GAHKARAREL ARDKLRMLGL GELEQRLPSE LSGGQQQRVA VARSLVLEPA VLLFDEPLSN
LDAKLRRRVR QEIRELQQSL ALTVLYVTHD QSEALAVSDR VIVMDGGRIA QQGTPHELYE
APASRFLADF IGDANLVDGR VISAGSGARF EAGAVAVPVG VGGLRAGPAT LALRPHRLRI
VAAGQGLFDG QCRRADYLGS HIEYLFTSPW GELLVFGPAD GPTCRRGESV GIDFDADHAI
VLPR
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