Gene Lcho_4307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4307 
Symbol 
ID6163084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4819008 
End bp4819916 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content71% 
IMG OID641667084 
ProductAraC family transcriptional regulator 
Protein accessionYP_001793323 
Protein GI171060974 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCG ATACCCTGGC CCATGAGATC GGCCGAATTG CCCGAAACGA CGGCCCTTGC 
CTGACCGAAC TGCCCGACCT GACGCTCTTC CGCAGCAGCC TCAAGACCGA GCCGACGCCC
TGCATCTATG CGCTCGGGCT GACCGTCGTC GCGCAGGGTG GCAAGCAGGT CACGGCCGGT
GAGCAGGTGA TCGATTACGG GCCGGGCCAG TCGCTGCTGA CTGCCGTCGA TCTGCCGGTG
ATCGGGCAGG TCACCCGGGC CGACCTGGCG CGGCCGTTCC TGGGGCTGGT GCTGACGCTG
GATGCACGCG CGCTGGTGCA GGCCGCCGCC GAGATGGATC GGCCACCCCT GCCGCGCGAC
CCGGCGCCGC GCGCGATCTC GCGGTGTGAG ACCGAAGCGC CCTTGCTCGA CGCGCTGATC
CGCCTGGTCC GGCTGCTGGG CGAGCCGCAG CTGATCGCGC ATGTCGCGCC GCTGATCCGG
CAGGAGATCA TGCTGCGCCT GCTGTGCGGC CCGCACGGCC CCTACCTGCG CCACCTGCTG
GCGGCGGGCT CGCCCAGCCA TCAGATCGCG CGCGCGATGG CGTGGCTCAA GCAGAACTTC
ACCGGCGACG TGCGGATCGA TGATCTGGCC GCCAGCGTGC ACATGAGCCC GTCGACCTTC
CGGCAGCACT TTCGCGGCCT GACCGGCATG AGCCCGCTGC AGTATCAGAA GCAGCTGCGC
CTGCAGGAGG CGCGGCAGCT GATGCTCAGC CACGACCTCG ACGCCGGCAG CACCGCCGCT
CGGGTGGGCT ACGAAAGCGC CTCGCAGTTC AGCCGCGACT ACAGCCGGCT GTTCGGCGCG
CCGCCGCAGC GCGACATCCG GCGCATGCGG CATCCGGGCG AGGGTGGCGT CGAGCCGGCG
ATGCCCTGA
 
Protein sequence
MPIDTLAHEI GRIARNDGPC LTELPDLTLF RSSLKTEPTP CIYALGLTVV AQGGKQVTAG 
EQVIDYGPGQ SLLTAVDLPV IGQVTRADLA RPFLGLVLTL DARALVQAAA EMDRPPLPRD
PAPRAISRCE TEAPLLDALI RLVRLLGEPQ LIAHVAPLIR QEIMLRLLCG PHGPYLRHLL
AAGSPSHQIA RAMAWLKQNF TGDVRIDDLA ASVHMSPSTF RQHFRGLTGM SPLQYQKQLR
LQEARQLMLS HDLDAGSTAA RVGYESASQF SRDYSRLFGA PPQRDIRRMR HPGEGGVEPA
MP