Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4303 |
Symbol | |
ID | 6162086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4813757 |
End bp | 4815094 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641667080 |
Product | fumarylacetoacetase |
Protein accession | YP_001793319 |
Protein GI | 171060970 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCGG CCTCGCTTTT CATGATCGAC GCCAGCCACG ACCCGGCCCT GCGCAGCTGG GTGGCCGGCG CCCACACGCC GGACACCGAC TTCCCGATCC AGAACCTGCC GCTGGGCATG TTCCGCCCCG CCGGCAGCAG CGCGCTGCTG CGCCCCGGCG TGGCGATCGG CGATCGGGTG ATCGACCTGC TGGCCGCGGT GCAGGCCGGC GTGCTGACCG GCGCTGCCGC CGATGCGCTG CAGGGCACCG AAGCCGGCAC GCTGAACCCG CTGATGGACC GCGGTGCGGC CGGCCGGCGT GCGCTGCGCA CGGCGCTGTC GGCCGCGCTG GCCGAGGGCA GCGCCGCACA GGCCGCGCTG CAGCCGTGCC TGCACGCGCT CGACGCGGTC GAGCTGGGCC TGCCCTGCCG CATCGGCGAC TACACCGACT TCTACACCGG CATCCACCAC GCCACCACGG TGGGCCAGCT GTTCCGCCCC GACAACCCGC TGCTGCCCAA CTACAAGTGG GTGCCGATCG GCTACCACGG CCGGGCCTCG TCGATCCGCG CCAGCGGCCA TGCCGTCGTG CGCCCGCACG GGCAGATCAA GGGCCCGAAC GACGAGGTGC CGGTCTACGC GCCGACCCGG CGCCTCGACC ACGAGCTCGA AGTGGGCGTG CTGATCGGCG GCGGCAATGC GCTGGGCGAG CCGATCGCGA TCGAGCAGGC CGAGGACCAT TTCTTCGGCC TGGTGCTGCT CAACGACTGG TCGGCGCGCG ACGTGCAGGC CTGGGAGTAC CAGCCGCTCG GCCCCTTCCT GTCCAAGAGC TTCGCCAGCA CGATCTCGCC GTGGATCGTC ACGCCCGAGG CGCTGGCGCC GTTCCGCGCG CCGTTCGGCC GCCCGGCCGG CGACCCGCAG CCGCTGCCCT ACCTCGACAG CGCCGCCAAC CGCGCGGCCG GCCACATCGA CCTGACGCTG GAGGTGTGGC TGCAGACCGC GCAGATGCGC GCCGACGGCC TGCCGCACGA GCGCCTGATG GCGTCGAACT TCACCGACGC CTACTGGACG CTGGCGCAGC TGATCACCCA CCACACCAGC AACGGCTGCG ACCTCGGCAG CGGCGACCTG CTGGGCTCGG GCACGCTCTC GGGGCCCGAC CCGAAACAAG GGGGCTCGCT GCTGGAGCTT TCGCTCGGCG GCAAGCAGCC GCTGACGCTG GCCAACGGCG AGCAGCGCAC CTTCCTGCAG GACGGCGACA GCGTGCTGCT GCGCGGTCAT TGCGCCCGAC CCGGCGCCGT GCGCATCGGT TTCGGCGCCT GCGAGGGCCG GGTGCTGCCG GCGCATCAGC GGGGCTGA
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Protein sequence | MSPASLFMID ASHDPALRSW VAGAHTPDTD FPIQNLPLGM FRPAGSSALL RPGVAIGDRV IDLLAAVQAG VLTGAAADAL QGTEAGTLNP LMDRGAAGRR ALRTALSAAL AEGSAAQAAL QPCLHALDAV ELGLPCRIGD YTDFYTGIHH ATTVGQLFRP DNPLLPNYKW VPIGYHGRAS SIRASGHAVV RPHGQIKGPN DEVPVYAPTR RLDHELEVGV LIGGGNALGE PIAIEQAEDH FFGLVLLNDW SARDVQAWEY QPLGPFLSKS FASTISPWIV TPEALAPFRA PFGRPAGDPQ PLPYLDSAAN RAAGHIDLTL EVWLQTAQMR ADGLPHERLM ASNFTDAYWT LAQLITHHTS NGCDLGSGDL LGSGTLSGPD PKQGGSLLEL SLGGKQPLTL ANGEQRTFLQ DGDSVLLRGH CARPGAVRIG FGACEGRVLP AHQRG
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