| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4275 |
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| Symbol | |
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| ID | 6161223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4783481 |
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| End bp | 4784497 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641667052 |
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| Product | transketolase central region |
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| Protein accession | YP_001793291 |
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| Protein GI | 171060942 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3958] Transketolase, C-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG TGAACACCAC CGCCACCGAG AAGAAGCCGC GCCTGACCAC CTCGGCCATG
ATCGCCTCGA TCGCCTCCGA AGGGCAGCGC GTCAAGGCCG CGCCGTTCGG CAAGGCGCTG
GTCGAACTGG CCGCGACCCG GCCCGAGATC GTCGGCATGA CGGCCGACCT GGCCAAGTAC
ACCGACCTGC ACCTGTTCGC GCAGGTCTAC CCCGAGCGCT TCCACCAGAT GGGCATGGCC
GAGCAGCTGC TGATGGCGGC GGCCGGCGGC ATGGCCAAGG AAGGCCTGAT CCCGTTCGCC
ACCACCTACG CGGTGTTCGG CACCCGGCGT GCCTACGACT TCATCCACCA GGTGATCGCC
GAGGAGAACC TCAACGTCAA GATGTGCTGC GCGCTGCCCG GCCTGACCAC CGGCTACGGC
CCCAGCCATC AGGCGACCGA CGACATCGCG ATGATGCGGG CCATCCCGGG CCTGACCATC
GTCGACCCCT GCGATGCGCT CGACCTCGAA CAGGCCGTGC CGCAGATCGC TGCGCACAAG
GGCCCGGTCT ACATGCGGCT TGCGCGTGGC AACGTGCCGC TGGTGCTCGA CGAATACGAC
TACAGCTTCG AACTCGGCAA GGCCAAGATG CTGCGCGAGG GCAACGAGGT GCTGGTGATC
TCCAGCGGCT TCATGACCAT GCGCGCGCTC GAAGTGGCGC AGACGCTGGC GGCCGACAAC
ATCGGCGTGG CGGTGCTGCA CTGCCCGACG ATCAAGCCGC TCGACGAGGC CACCATCATC
GAGGCCGTGA AGTACAAGCA TCGGCTGGTC GTGATCGCCG AGAACCACTC GGTGATCGGC
GGACTGGGCG AGGCGGTGGC GAGCGCGCTG CTGCGCCATC GCGTGCAGCC GGCGGGCTTC
CAGATGGCGG GGCTGCCCGA TGCCTACCTC GACGCCGGCG CGCTGCCGAC GCTGCACGAC
CGCTACGGCA TCAGCCGCGA AGCGCTGGCC GGCCGCATCA AGGGCTGGCT GGGCTGA
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| Protein sequence | MSAVNTTATE KKPRLTTSAM IASIASEGQR VKAAPFGKAL VELAATRPEI VGMTADLAKY
TDLHLFAQVY PERFHQMGMA EQLLMAAAGG MAKEGLIPFA TTYAVFGTRR AYDFIHQVIA
EENLNVKMCC ALPGLTTGYG PSHQATDDIA MMRAIPGLTI VDPCDALDLE QAVPQIAAHK
GPVYMRLARG NVPLVLDEYD YSFELGKAKM LREGNEVLVI SSGFMTMRAL EVAQTLAADN
IGVAVLHCPT IKPLDEATII EAVKYKHRLV VIAENHSVIG GLGEAVASAL LRHRVQPAGF
QMAGLPDAYL DAGALPTLHD RYGISREALA GRIKGWLG
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