Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4247 |
Symbol | |
ID | 6161024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4757232 |
End bp | 4758209 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641667024 |
Product | hypothetical protein |
Protein accession | YP_001793263 |
Protein GI | 171060914 |
COG category | [S] Function unknown |
COG ID | [COG4984] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.990494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTTC CTCTGGCCCT TCATGAACTG GCCGCCCGGC ACCGGCTCGA TGCCCCCGCG CTGCGGCGGC TCGGGCAGCT CGCCGGCCTC GAGCAAGCAC ACGAGGCGCT GAGCCGCTGG CTGCCACGCG GGGTGGCAGC ACTGGCCGCC GTGCTGCTGG GCAGCGGCCT GGTCTTCTGG GTCGCCGCCA ACTGGGATCT GCTCGGCCGT GTCGGCCAGT TCGCGCTGCT GCAGGCGGCC GTGGTGCTGG CGATCGGCGC CACCCTGTGG CGCGGCCTGC AGCGGCTGCC GGCCGCGCTG CTCGCGCTGC TGGGCATCGG CGGGCTGTTC GCCTACTTCG GCCAGACCTA CCAGACCGGC GCCGACGCCT GGCAGCTGTT CGCGCTCTGG GCGGCGCTGG CGGTGCCGCT GGGCCTGGCG CTGCGCAGCG ATCTGCTGTG GTCGGCCTGG GTGCTGGTGG CGATGACGGC GATCGCGCTG TGGCTGCAGG CCCACATCAG CCCGGGGTTC GAGACGCAGG CACGCGATCT GCCGATCTGG CTGACCGGCT GGTCCGGTGC CGTGCTGCTG GCGGTGCTGA TGTCGCCACC GATCGGTGGG CGGCTCGGTG CCGGCAAGCG GGCCCGGCGC GTGGCGGTGG CCTTCGCGAC CGTGCTGGTG GCCGGCGGCG CCCTGTTCGG GCTGTTCCAG AGCCCGGTGG CCTGGCCGTA CCCGATCGGC CTGCTGCTGT TGGCCGCGGC GGCGGCCCAG CTGTATCGGG CGCGCAGCTT CGACCTCGCC CTTCTCGGCT TCGTCGCGCT GGCGCTGGAC GTGCTGCTGC TGGCCGGCCT GTCGCGCGGG CTCTATCAGA TGGACGAGCG CAACGTGATC AGTCAGATGC TGCTGATCAC GGTCGCGTCG GCGCTGCTGC TCTCGCTGAC CGTCAAGCTG GTGCTGCAAC GGGCCCGCGC CGTGCAGCAG GAGTCGCACC ATGTCTGA
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Protein sequence | MDLPLALHEL AARHRLDAPA LRRLGQLAGL EQAHEALSRW LPRGVAALAA VLLGSGLVFW VAANWDLLGR VGQFALLQAA VVLAIGATLW RGLQRLPAAL LALLGIGGLF AYFGQTYQTG ADAWQLFALW AALAVPLGLA LRSDLLWSAW VLVAMTAIAL WLQAHISPGF ETQARDLPIW LTGWSGAVLL AVLMSPPIGG RLGAGKRARR VAVAFATVLV AGGALFGLFQ SPVAWPYPIG LLLLAAAAAQ LYRARSFDLA LLGFVALALD VLLLAGLSRG LYQMDERNVI SQMLLITVAS ALLLSLTVKL VLQRARAVQQ ESHHV
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