| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4241 |
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| Symbol | |
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| ID | 6161130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4749716 |
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| End bp | 4750474 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641667018 |
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| Product | integral membrane protein |
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| Protein accession | YP_001793257 |
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| Protein GI | 171060908 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5473] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCA CCGCTTCGAT GCCCTTGCGT CCCCTGCGCC CGCTGCAGCC CCTGTCCTGG
CTGGAACACG CCTGGCACGA CATCCGCCTG ACGCCCGGGG TCAGTTTCGC CCACGGTGCA
GCGCTGGCCG CGTTCGGCTG GCTGCTGCTG GCGCTGGCGC ACCAGCGCTT CTGGGTGCTG
GCCGGCGCGC TGTCGGGTTT CCTGATCGTC GCGCCGGTGC TGGTCACCGG CCTCTACGCC
ACCAGCCGCG CGCTCGAGCG TGGCGAGGCC GCCGGCTGGG GCACGGTGTG GGCGGTCTGG
CGCTCGCTCG ATCGGCGGCT GGTGCTGTTC GGCCTGCTGC TCGGTCTGGC CGGCACCGGC
TGGGTGATGA CGTCGGCCGC GCTGATCACG CTGTTCGCGC CCGGCCCCGT CAACACGCCG
GTGGATTTCC TGCGGCTGGT GGTGGCCAAC CGCTCGTCGT GGCTGTTCGA GGCCTGGCTC
GGGCTGGGCG CCCTGCTGGC CGCGCCGGTG TTCGCCTCCA GCGTGCTGGC GATCCCGATG
CTGCTCGACC AGCGGGTCAG CCTGCTCGAT GCGGTGCTCG CGAGCTGGCG CAGCGTGCTC
GACAACCCGC TGCCGATGGC GGTCTGGGCT GCGCTGCTGA TGGGCTTCAC GCTGCTCGGG
CTGGGTTCCG CGCTGCTCGG GCTGGTGGCG GTGGTGCCGA TGCTCGGTCA CGCGAGCTGG
TATGCCTATC GCGACCTGAT GCCGGTCGAG CGTCGCTGA
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| Protein sequence | MNATASMPLR PLRPLQPLSW LEHAWHDIRL TPGVSFAHGA ALAAFGWLLL ALAHQRFWVL
AGALSGFLIV APVLVTGLYA TSRALERGEA AGWGTVWAVW RSLDRRLVLF GLLLGLAGTG
WVMTSAALIT LFAPGPVNTP VDFLRLVVAN RSSWLFEAWL GLGALLAAPV FASSVLAIPM
LLDQRVSLLD AVLASWRSVL DNPLPMAVWA ALLMGFTLLG LGSALLGLVA VVPMLGHASW
YAYRDLMPVE RR
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