Gene Lcho_4226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4226 
Symbol 
ID6160686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4737426 
End bp4738232 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content70% 
IMG OID641667003 
ProductABC transporter-related protein 
Protein accessionYP_001793242 
Protein GI171060893 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.219808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACTCGC CCGGCCCGGC GAACGAGAAG CTGGCGCAGC CGGCCCGGGC GGGCCGCAAC 
GGCGCGTCGA GCCGGCTCGA AGCCGACGGC CTCGAAAAGA GCTACGGCGC GCGCAAGGTG
GTCAAGGACA TCCACCTGGC CGTCAACAGC GGCGAGGTGG TCGGCCTGCT GGGCCCCAAC
GGCGCGGGCA AGACCACCAG CTTCTACATG CTGGTCGGCC TGGTGCGCGC CGATGCCGGA
CAGATCCGCA TCGACGGCGC GCCGGTGCAG CGCCTGCCGA TCCACCAGCG CGCCCGCATG
GGGCTGTCGT ACCTGCCGCA GGAGGCGTCG ATCTTCCGGC GCCTGACGGT CGAGGAGAAC
ATCCGCGCCG TGCTCGAACT GCAGCAGGAC GCCGAAGGCC GCCGCTACAG CGCGCAGCGC
ATCGAGCAGA TGCTCGACGG CCTGCTGGCC GACCTGTCGA TCGAGAAGCT GCGCGAATCG
CCCGCGCCGG CGCTGTCGGG CGGTGAGCGC CGACGCGTCG AGATCGCCCG TGCGCTGGCC
ACGCAGCCGC GCTTCATCCT GCTCGACGAG CCGTTTGCCG GCGTCGACCC GATCGCGGTG
CTCGAGATCC AGCGCATCAT CGGTTTCCTC AAGGCGCGTG GCATCGGCGT GCTGATCACC
GACCACAACG TGCGCGAGAC GCTGGGCATC TGCGACCGCG CCTACATCAT CAGCGAAGGC
CGGGTGCTGG CCGAAGGCAC GCCCGCGGCG ATCGTCGAGA ACCCGGACGT CCGCAAGGTC
TACCTCGGCG AACATTTCCG CATGTAA
 
Protein sequence
MNSPGPANEK LAQPARAGRN GASSRLEADG LEKSYGARKV VKDIHLAVNS GEVVGLLGPN 
GAGKTTSFYM LVGLVRADAG QIRIDGAPVQ RLPIHQRARM GLSYLPQEAS IFRRLTVEEN
IRAVLELQQD AEGRRYSAQR IEQMLDGLLA DLSIEKLRES PAPALSGGER RRVEIARALA
TQPRFILLDE PFAGVDPIAV LEIQRIIGFL KARGIGVLIT DHNVRETLGI CDRAYIISEG
RVLAEGTPAA IVENPDVRKV YLGEHFRM