Gene Lcho_4215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4215 
Symbol 
ID6163807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp4726506 
End bp4727168 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID641666992 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001793231 
Protein GI171060882 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0158899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCC GCACCACCCT CAGCCTCAGC AGCAAGAACT ATTCGTCGTG GTCGTTGCGC 
GGCTGGCTGC TGGCCCGCTT CGCCGGGCTC GATTTCGACG AGGTCATGCT GGCCGCCGAC 
GACCCGACCG CCAAGGCCGA GATGCTGCTG CTGGCGCCGT CGATGCTGGT GCCCTGCCTG 
CGCCACAACG GTGCCACCGT GTGGGACACG CTGGCGATCG CCGAGTACCT CAACGAGATC 
AAGCCCAAGG CCGGCCTGCT GCCCGCCGAC CGCGCCGCGC GCGCCCATTG CCGCGCCATC 
TGCGGCGAGA TGCATTCGGG CTTCGCCTCG CTGCGCTCGG CGCTGCCGAT GAACCTGAAG 
GGCCACTTCC CGCACTACAA GGTCTGGAAC CGGGCCCAGA TCGACATCGC CCGCGTGCTG 
CAGATCTGGA GCGAGTGCCT GCAGACCTAC GGCGGCCCCT ACCTGTTCGG CGAACACCCG 
ACGGTGGCCG ACGCGATGTA CGCGCCGGTG GTGACGCGCC TGCGCACCTA CGACGTCAAG 
GTGGCGCACA AGGCCTGCGC GGCCTATTGC GACGCCATCA TGGCGCTGCC GGAAATGATC 
GAGTGGATCG CCGCGGCCAA GCTCGAACCC GAAGCGATCG ACGAGCTCGA GGTCGAGTTC 
TGA
 
Protein sequence
MAVRTTLSLS SKNYSSWSLR GWLLARFAGL DFDEVMLAAD DPTAKAEMLL LAPSMLVPCL 
RHNGATVWDT LAIAEYLNEI KPKAGLLPAD RAARAHCRAI CGEMHSGFAS LRSALPMNLK 
GHFPHYKVWN RAQIDIARVL QIWSECLQTY GGPYLFGEHP TVADAMYAPV VTRLRTYDVK 
VAHKACAAYC DAIMALPEMI EWIAAAKLEP EAIDELEVEF