| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4209 |
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| Symbol | |
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| ID | 6161901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4716868 |
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| End bp | 4717803 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641666986 |
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| Product | restriction endonuclease |
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| Protein accession | YP_001793225 |
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| Protein GI | 171060876 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1715] Restriction endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000116308 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGATCC CGACGTATGA CCGTTTCATC GAGCCACTGC TGCGCTTTCT GGCTCTCAAC
CCGGACGGGA TATCCGCCCG CGAAGCGCAC GACTACGCGG CAAGTGCCTT GGGACTCAGC
GACGAGGACC GCTTGCAGCG CCTGCCCAGC GGGCTCCAAC CCATCTACAA GAACCGTGCG
GGCTGGGCGC ACGACCGCCT CAAGCGCGCC GGCCTTTCCA GCAGCCCTCG GCGCGGCTTC
TGGCAGCTCA CTCCCGCCGG CACGGTGTTC GTGAACACGC ATCCCGCGCC GTTCGATAGC
GCCTTGGTCG AGCGCCTCGC GACAGACTTC ATGGGCGTAC GGTTGCGAGC GGTCGATGGC
CGAACAACGA ATGTGCCCAG CGGTGATGCG CCGGCATCAG GTACGTCGAT TGCGGCCCTG
GCGAGTCCGG ATGACCGTCT GGGTCAGGCG CTCGATGAAA TGCGCCAGGC CGCTGCCCGT
GATTTGCTCG AACTTCTGAG CAAGGTTTCG CCAGCGTACT TCGAGACCAT CGTGCTCGAC
CTGTTGCATC GGCTGGGCTA CGGCGCCAGC AGGGCCGACC TGCAGCGTGT CGGCGGCAGT
GGCGATGGCG GCATCGACGG CGTGATTGCG CTCGATCGGC TCGGTCTCGA AAAGGTGTAC
GTTCAGGCCA AGCGCTGGCA GAACAACGTC GGCCGGCCGG AATTGCAGGC CTTCTATGGC
GCCTTGGCGG GGCAGAAGGC GAAGAAGGGT GTGTTCATCA CCACGTCGGC GTACACGGTC
CAGGCACTTG ACTTTGCGCG GTCGGTGGAG GGCATGGTGC TGATCGATGG CGAGCGCCTC
GCCGATCTGA TGATCGACTG CGAATTGGGC GTTACTTCCC GGACTTTCAA AGTGCCCAAG
ATCGACAGCG ACTACTTTGA CGAAGAGGAT GGTTGA
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| Protein sequence | MPIPTYDRFI EPLLRFLALN PDGISAREAH DYAASALGLS DEDRLQRLPS GLQPIYKNRA
GWAHDRLKRA GLSSSPRRGF WQLTPAGTVF VNTHPAPFDS ALVERLATDF MGVRLRAVDG
RTTNVPSGDA PASGTSIAAL ASPDDRLGQA LDEMRQAAAR DLLELLSKVS PAYFETIVLD
LLHRLGYGAS RADLQRVGGS GDGGIDGVIA LDRLGLEKVY VQAKRWQNNV GRPELQAFYG
ALAGQKAKKG VFITTSAYTV QALDFARSVE GMVLIDGERL ADLMIDCELG VTSRTFKVPK
IDSDYFDEED G
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