| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4202 |
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| Symbol | |
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| ID | 6161387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4710164 |
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| End bp | 4710628 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666979 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001793218 |
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| Protein GI | 171060869 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000106672 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGACCC ACACGCCCGC CGATCCCGAT TACGCGCAAC GGGTGCGCGA ATCCTTCGCC
CGCCAGGCCG CGATGCAGCT GATCGGCGCC GAGCTGATCT CGGTGGCGCC GGGCGAGGTG
GTGATCGATC TGCCGCACGG GCCGACAGTG ACGCAGCAGC ACGGCTTCGT GCACGCCGGC
ATCGTCACGA CCGCGCTCGA TTCGGCCTGC GGTTATGCCG CATCGAGCCT GATGCCGGCC
GACGCCGGCG TGCTGTCGAT CGAGTTCAAG GTCAACATGC TGGCCCCCGC GCGCGGGCCG
GTGCTGCGCA TGACGGGCCA CGTGGTCAAG GCCGGCCGCA CGATCAGCGT GGTCGAGGGG
CGGGCCGTGC AGCCGCATCC GGGCAAGCCC GGCGAGGAAC AACTCGTGGC GACCATGAGC
GCCACGATGA TGACCATCAC CGGCCGCGCC GACGTGCGCG GCTGA
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| Protein sequence | MSTHTPADPD YAQRVRESFA RQAAMQLIGA ELISVAPGEV VIDLPHGPTV TQQHGFVHAG
IVTTALDSAC GYAASSLMPA DAGVLSIEFK VNMLAPARGP VLRMTGHVVK AGRTISVVEG
RAVQPHPGKP GEEQLVATMS ATMMTITGRA DVRG
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