| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4196 |
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| Symbol | |
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| ID | 6161381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4704139 |
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| End bp | 4706196 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666973 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_001793212 |
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| Protein GI | 171060863 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0000070929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTTTACC CCCAGGAATT TGACGTGATC GTGGTCGGCG GTGGCCATGC CGGCACCGAG
GCCGCACTGG CCGCCGCCCG CATGGGCTGC GACACGCTGC TGCTGACGCA CAACATCGAG
ACGCTCGGCC AGATGAGCTG CAACCCGTCG ATCGGCGGCA TCGGCAAGGG CCACCTCGTG
AAGGAGGTCG ACGCGCTCGG CGGCGCGATG GCCGCGGCCA CCGACGAGTC GGGCATCCAG
TTCCGCATCC TCAATTCGAG CAAGGGCCCG GCCGTGCGCG CCACCCGCGC GCAGGCCGAC
CGCATCCTCT ACAAGGCCGC GATCCGGCAG CGGCTGGAGA ACCAGCCGCA CTTGTGGCTG
TTCCAGCAGG CGGTCGACGA CCTGATGGTC GAGGGTGATC GTGTCGTCGG CGCGGTCACG
CAGGTCGGCA TCCGCTTTCG CGCCCGCACC GTCGTGCTGA CGGCCGGCAC CTTTCTCGAC
GGCAAGATCC ACGTCGGCCT GAACAACTAC CCCGCAGGCC GCGCCGGTGA CCCGCCGGCC
GTGAGCCTGT CGGCGCGGCT GAAGGAGCTG AAGCTGCCGC AAGGCCGGCT CAAGACCGGC
ACACCGCCGC GCATCGACGG CCGCTCGATC GACTTCTCCA AGCTGATCGA ACAACCCGGC
GACGGCGTGG CAGCAGCCGA CGGCACACCC GCCAGCTCGC CGATGCCGGT GTTCAGCTTC
CTCGGTTCGG CAGCACAGCA CCCGCGCCAG ATGCCGTGCT GGATCACCAA CACCAACCAG
CGCACGCACG ACATCCTGCG CACCGGCTTC GACCGCAGCC CCATGTTCAC CGGCGTGATC
GAGGGCGTGG GCCCGCGCTA CTGCCCGAGC ATCGAGGACA AGATCAACCG CTTCGCCGAC
AAGAACTCGC ACCAGATCTT CCTGGAGCCC GAGGGCCTGA CGACCAACGA GTACTACCCG
AACGGCATCT CGACCTCGCT GCCCTTCGAC ATCCAGCTCG CCGCCGTGCG CACGATGCTC
GGCATGGAGA ACGCCTACAT CCTGCGGCCC GGCTACGCGA TCGAATACGA CTACTTCGAC
CCGCGCGAGC TGAAGACGAG CTTCGAGTCG AAGGCGATCG GCGGGCTGTT TTTTGCCGGC
CAGATCAACG GCACCACCGG CTACGAAGAA GCTGCGGCGC AAGGCCTGTA CGCCGGCGCC
AATGCCGCGC TGCAGGCGCA GGGCAATCCA CCGTTGAGCT TCGGCCGCGA CCAGGCTTAT
CTGGGCGTGC TGGTCGACGA CCTCATCACC AAGGGCGTGA CCGAGCCGTA CCGCATGTTC
ACCAGCCGGG CCGAGTTCCG CCTGCAGCTG CGCGAGGACA ACGCCGACAT GCGCCTGACC
GAGATCGGCC GCTCGGTCGG GTTGGTCGAC GACGTCCGCT GGGATGCGTT CAACCGCAAG
CGCGATGCTG TTTCACGTGA AACCGAACGA CTCAAGAGCA CCTGGGTGCA CCCCGCGATC
CTGCCCGCCG CCGACTCCGA GCGGCTATTC GGCAAGGCGC TGGAGCACGA ATACAACCTG
GCCGACCTGA TGCGCCGCCC CGGCATCAGC TACGACACCG TCGCCGAGGC GCTCACCATC
GCCCGGCCGG GCAACTACGT TTCACGTGAA ACGTTGAATT CGCAGCTCGG TGCCGACCTT
GCCGCCGCGG TGATCGAGCA GCTCGAGATC GCCATCAAGT ACGCCGGCTA CATCGACAAG
CAGAACGAGG ACGTGCAGCG CGCCGCCCAC TACGAGCACC TGCGCCTGCC TGACGAACTC
GATTACGCCC AGGTCACCGC CCTCTCCTTC GAGGTGCGCC AGAAGCTGAC GAAGCACCGG
CCCGAAACGC TGGGCCAGGC CTCGCGCATC TCGGGCGTGA CGCCGGCCGC GCTGTCGCTG
CTGCTGATCC ACCTGAAGCG CGGGCGCTTC AAGGGATTCA CTGGCAACGA CAAGGTCGCC
GCCGGCCCGA TCAGCGCAGA CGCCGTCAAC ACCGACATCA ACGACAACCC AGCACACGCC
GCCACCGATG CAGCCTGA
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| Protein sequence | MLYPQEFDVI VVGGGHAGTE AALAAARMGC DTLLLTHNIE TLGQMSCNPS IGGIGKGHLV
KEVDALGGAM AAATDESGIQ FRILNSSKGP AVRATRAQAD RILYKAAIRQ RLENQPHLWL
FQQAVDDLMV EGDRVVGAVT QVGIRFRART VVLTAGTFLD GKIHVGLNNY PAGRAGDPPA
VSLSARLKEL KLPQGRLKTG TPPRIDGRSI DFSKLIEQPG DGVAAADGTP ASSPMPVFSF
LGSAAQHPRQ MPCWITNTNQ RTHDILRTGF DRSPMFTGVI EGVGPRYCPS IEDKINRFAD
KNSHQIFLEP EGLTTNEYYP NGISTSLPFD IQLAAVRTML GMENAYILRP GYAIEYDYFD
PRELKTSFES KAIGGLFFAG QINGTTGYEE AAAQGLYAGA NAALQAQGNP PLSFGRDQAY
LGVLVDDLIT KGVTEPYRMF TSRAEFRLQL REDNADMRLT EIGRSVGLVD DVRWDAFNRK
RDAVSRETER LKSTWVHPAI LPAADSERLF GKALEHEYNL ADLMRRPGIS YDTVAEALTI
ARPGNYVSRE TLNSQLGADL AAAVIEQLEI AIKYAGYIDK QNEDVQRAAH YEHLRLPDEL
DYAQVTALSF EVRQKLTKHR PETLGQASRI SGVTPAALSL LLIHLKRGRF KGFTGNDKVA
AGPISADAVN TDINDNPAHA ATDAA
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