| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4194 |
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| Symbol | |
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| ID | 6160815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4702704 |
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| End bp | 4703369 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666971 |
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| Product | yecA family protein |
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| Protein accession | YP_001793210 |
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| Protein GI | 171060861 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
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| TIGRFAM ID | [TIGR02292] yecA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000432994 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGCACC CGCAATACAA CCCGCAACTG GCGACCGCAC CCTTGTCCGA CGCCGAGATC
GACCAGCTCG ACGAGCTGCT CGCCGCGCTG CCGGGCGACG ACGTGATGGA CGTCGAGATG
CTCGACGGCT ACCTGACCGC CCTGCTCGTC AGCCCCACCC TGCCGCCGGC CGACGCCTGG
ATCCCGCGCG TCTGGGGCGG CGCCGAGGAC AGCCCGGCGC CGTTTGCCAG CGGCAAGCAG
ACCAAGCGTT TCGTGCAGCT GGTGCTGCGC CAGATCGCCG CCATCGACCG CCAGCTGCAG
GGCGACTTCG ACCGCTTCGA GCCCTGGTTC GACATGGCCG TGATCGAGGA CGTCGAGGTG
GTCGACGCGC AGGCCTGGTG CGCCGGTTTC CTGCACGCGC TCGACCTGAC GCAGGACCAG
TGGCAGGACC ACTGGGACCA GCCCGACGTG GCACTGGCGC TGCGCCCGAT CAGCCTGCTG
GGCGGTGACG GCCTGGAGCC CGCCGACGCC GAGGAGGTCG ACACCACCAT GAAGCGCGAC
CGCATGAGCC GCCTGGTGCC CGATGCGGTC GAGGCGCTGT ATCGCCACTG GCGTCCGCTG
GCCGATGACG AAGACGAGGA CGACCTCGGC GACGACGCCG GCAGCGACAC CCCCCCGGCC
GCGTGA
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| Protein sequence | MKHPQYNPQL ATAPLSDAEI DQLDELLAAL PGDDVMDVEM LDGYLTALLV SPTLPPADAW
IPRVWGGAED SPAPFASGKQ TKRFVQLVLR QIAAIDRQLQ GDFDRFEPWF DMAVIEDVEV
VDAQAWCAGF LHALDLTQDQ WQDHWDQPDV ALALRPISLL GGDGLEPADA EEVDTTMKRD
RMSRLVPDAV EALYRHWRPL ADDEDEDDLG DDAGSDTPPA A
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