| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4178 |
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| Symbol | |
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| ID | 6162230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4686624 |
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| End bp | 4687313 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666955 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001793194 |
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| Protein GI | 171060845 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCTC TCGCCTCATC TGCCGCTGTC TCGCTGAACA CCCGCCTGCC CGCACGCGGC
GCCACCGTGA TCGCGCTGGC CGCTGCCATC GCGCTTGCCG CCTGCGCCGA CATGAGCGAG
CGCCAGAAGG GCACCGCCGG CGGCGCGGCG ATCGGCGCGG TGGGCGGCGC CATCCTCAGC
AAGGCGACCG GCGGCAAGGC CGGCACCGGT GCGGTGGTGG GCGGGGCGGT CGGCGCGGTG
GCCGGCAACC TCTGGTCCAA GCGCATGGAA GACAAGCGCA AGGCGATGGA GGCCGCCACG
CAAGGCACCG GCATCGACGT GGTGCGCACC ACCGACAACC AGCTCAAGGT CAACATCCCG
GCCGATTTCT CGTTCGACGT CGGCCGCTCC GCCGTCAAGC CGGTGATGGT GCCGGTGCTC
GACAAGCTCG CCCAGGGCCT CGACGCCACG GTGCAGGTGC AGGTGATCGG CCACACCGAC
AGCAGCGGCA GCGATGCGGT CAACAACCCG CTGTCGCTCG ACCGGGCCGA GGCGGTGCGC
GACTACCTGT CGCGCCACGG CGTGCCGGCC GCGCGCATCC AGGTCGAAGG CCGCGGCGAG
CGCGAGCCGG TGGCCGACAA CGCCACCCCC GACGGCCGGG CGCAGAACCG CCGCGTCGAG
ATCTTCCTGC GCGAGCCGCA GCCGTCCTGA
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| Protein sequence | MKSLASSAAV SLNTRLPARG ATVIALAAAI ALAACADMSE RQKGTAGGAA IGAVGGAILS
KATGGKAGTG AVVGGAVGAV AGNLWSKRME DKRKAMEAAT QGTGIDVVRT TDNQLKVNIP
ADFSFDVGRS AVKPVMVPVL DKLAQGLDAT VQVQVIGHTD SSGSDAVNNP LSLDRAEAVR
DYLSRHGVPA ARIQVEGRGE REPVADNATP DGRAQNRRVE IFLREPQPS
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