| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4166 |
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| Symbol | |
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| ID | 6162703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4666887 |
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| End bp | 4669091 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666943 |
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| Product | malate synthase G |
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| Protein accession | YP_001793182 |
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| Protein GI | 171060833 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01345] malate synthase G |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCAC GCACCCCCAT CCACGGCCTG CAAGTGGCCA CCGAGCTGTT CCGTTTCATC
GAAGGCGAAG TGCTGCCCGG CACCGGCGTG TCGAGTTCGG AGTTCTGGGC CGGCTTCGAC
CACATCGTCG CCGACCTGGC GCCCAAGAAC GCCGCGCTGC TGGCCGAGCG TGACCGCATC
CAGAGCGCGA TGGACGCCTG GCACAGCGCC AACCCCGGCC CGATCACCGA CATGCCGGCG
TATCGCGCGC ATCTGGAGCA GATCGGCTAC CTGGTGCCGG TGCCCGCCAA CGTGCAGGTC
ACCACCGCCA ACGTCGACGC CGAACTGGCG CTGCAGGCCG GCCCGCAGCT GGTGGTGCCG
ATCATGAACG CGCGCTACGC GCTCAACGCC GCCAACGCGC GCTGGGGCAG CCTGTACGAC
GCGCTGTACG GCACCGACGC GATCTCCGAG GCCGACGGCG CCGAGCGCGC CGGCGGCTAC
AACCCGGTGC GCGGCGCCAA GGTCATCGCC TACGCGCGTC AGGTGCTCGA CAACGCCGCG
CCGCTGGTCA ACGCCAGCCA CGTCAATGCC ACCGGCTACG CCATCGAGGC CGGCCAGCTG
GTCGTCAGCA TGGCCGGTGG CGTGCTCACC GGCCTGGCCG ATCCGGCCCA GCTGGTCGGC
TACACCGGCG ACGCCGCCGC GCCGAAGTCG GTGCTGCTGG TGCACAACGG CCTGCACCTG
GACATCCAGA TCGACCGCAG CACGACCATC GGCAAGAGCG ACGCCGCCGG CATCAGCGAT
GTCGTCGTCG AATCGGCGCT GTCGACCATC CTCGACCTCG AAGACTCGAT CGCCGCGGTC
GATGCCGAGG ACAAGGTGCT GGCCTACCGC AACTGGCTCG GCATCCAGCT CGGCACGCTG
ACCGAAGAGG TCGCCAAGGG TGGCAAGACC TTCACGCGCC GCCTCAACGC CGACCGCATC
TACACCGCGC CCGACGGCTC GGGCGAGGTC AAGCTGCACG GCCGCTCGCT GATGTTCCTG
CGCAATGTCG GCCATCTGAT GACGAACCCG GCGGTGCTGT GGGGCCCCGA GGGCCGCGAG
ATTCCGGAAG GCATCCTCGA CGCCGTGGTC ACCACCACGA TCGCGCTGCA CGACCTGAAG
CGCCACGGCA TCAACGGCCT GAGCAACAGC CGCACCGGCA GCATCTACAT CGTCAAGCCC
AAGATGCACG GCCCAGCCGA AGTGGCCTTT GCCGCCGAGC TGTTCAGCCG CGTCGAGCTG
CTGCTGGGCC TGCCCGACAG CACCGTCAAG CTCGGCATCA TGGACGAGGA GCGCCGCACC
AGCGTCAACC TGAAGGCCTG CATCGCCGCC GCTTCGAGCC GCGTCGCCTT CATCAACACC
GGCTTCCTCG ACCGCACCGG CGACGAGATG CACACCGCCA TGCTGGCCGG CCCGATGATG
CGCAAGGGCG ACATCAAGGG CAGCGCCTGG ATCGCCGCCT ACGAGCGCCG CAACGTGCTG
ATCGGCCTCT CCTGCGGCCT GCGTGGCCGC GCGCAGATCG GCAAGGGCAT GTGGGCCATG
CCCGACCTGA TGGCCGCGAT GCTGGAGCAG AAGATCGGCC ACCCCAAGGC CGGTGCCAAC
ACCGCCTGGG TGCCGAGCCC GACCGCCGCG ACGCTGCACG CGCTGCACTA CCACCAGGTC
AGCGTGGCCG CGGTGCAGCA GCAGATCGAG CAGTCCGGCG AAGCGGCCGA CCCGGCCATC
AGCGAGACGC TGCTGACCAA CCTGCTGACG ATTCCGGTCG TCGCCGAAGC CAAGTGGAGC
GCCACCGAGC GCCAGCAGGA GATCGACAAC AACGCCCAGG GCATCCTGGG TTACGTGGTG
CGCTGGGTCG ACCAGGGCGT GGGCTGCTCC AAGGTGCCCG ACATCAACGG CGTCGGCCTG
ATGGAAGACC GCGCCACCCT GCGCATCAGC AGCCAGCACA TCGCCAACTG GCTGCACCAC
GGCGTGGTGA CCGAAGCGCA GGTGCGCGAG ACCTTTGCCC GCATGGCCGC GGTGGTGGAC
GGCCAGAACG CCGGCGACCC GCTCTACAAG GCCATGGCCG GCAACCCGGA CTGCGCGGCC
TATCAGGCGG CGCTGGACCT GGTGTTCAAG GGCAAGGAGC AGCCGAGTGG GTACACCGAG
CCGCTGCTGC ATGCGTGGCG GTTGAAGGTG AAGGCGGCGG CTTGA
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| Protein sequence | MNSRTPIHGL QVATELFRFI EGEVLPGTGV SSSEFWAGFD HIVADLAPKN AALLAERDRI
QSAMDAWHSA NPGPITDMPA YRAHLEQIGY LVPVPANVQV TTANVDAELA LQAGPQLVVP
IMNARYALNA ANARWGSLYD ALYGTDAISE ADGAERAGGY NPVRGAKVIA YARQVLDNAA
PLVNASHVNA TGYAIEAGQL VVSMAGGVLT GLADPAQLVG YTGDAAAPKS VLLVHNGLHL
DIQIDRSTTI GKSDAAGISD VVVESALSTI LDLEDSIAAV DAEDKVLAYR NWLGIQLGTL
TEEVAKGGKT FTRRLNADRI YTAPDGSGEV KLHGRSLMFL RNVGHLMTNP AVLWGPEGRE
IPEGILDAVV TTTIALHDLK RHGINGLSNS RTGSIYIVKP KMHGPAEVAF AAELFSRVEL
LLGLPDSTVK LGIMDEERRT SVNLKACIAA ASSRVAFINT GFLDRTGDEM HTAMLAGPMM
RKGDIKGSAW IAAYERRNVL IGLSCGLRGR AQIGKGMWAM PDLMAAMLEQ KIGHPKAGAN
TAWVPSPTAA TLHALHYHQV SVAAVQQQIE QSGEAADPAI SETLLTNLLT IPVVAEAKWS
ATERQQEIDN NAQGILGYVV RWVDQGVGCS KVPDINGVGL MEDRATLRIS SQHIANWLHH
GVVTEAQVRE TFARMAAVVD GQNAGDPLYK AMAGNPDCAA YQAALDLVFK GKEQPSGYTE
PLLHAWRLKV KAAA
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