Gene Lcho_4153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4153 
Symbol 
ID6164051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp4657513 
End bp4658604 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content70% 
IMG OID641666931 
Productintegrase catalytic region 
Protein accessionYP_001793170 
Protein GI171060821 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCC TGGAAGATCG CCAAGCCCTG TCGCGCGACA TCGACGCCGC GCATGCGGCC 
GGCGCTCGAT TGGCGCCAGC CTGTGAGGTG GCGGGCATCG ACGCGCGCAC GCTGCAGCGC 
TGGAAGACCA GCCAGGGCCT CACGCAAGGC GATGGCCGGC CACAGGCCGT GCGCCCGATG 
CCCAGTCATG CCCTGAGTGA GGCCGAGCGT GCCGCGCTGC TGGCGGTGGC CAACGAGCCG 
CGCTTCGCCT CGACGCCGCC GGCGCGCATC GTGCCGATGC TGGCCGACGA GGGCGTGTAC 
CTGGGCAGCG AGTCGAGCCT GGCGCGCGTG CTCAAGGCCG CCGGGCAGAA CACGCGCCGT 
GGCCGCGCCA AGGCGCCCAA AGCCTCGCGG CCACCCACCA CGCACATCGC CACCGCTCCC 
GGGCAGGTGT GGTGCTGGGA CATGACCTAC CTGCCGGCCA AGGTGATGGG CCGCTGGTTC 
CATCTGTACC TGATCCTGGA CTTGTACAGC CGCAAGATCG TGGGCGCCGA GGTGCACGAC 
AGCGACGACT CCGACCACGC GGTGCACCTG GTGCGCCGCA CCGCGCTGGC CGAGGGGATT 
GCAGCGATGG ACACCAAGCC GGTGCTGCAC GGCGACAACG GCGCCACGCT CAAGGCCACC 
ACGGTCCTGG CGATGCTCAA TTGGCTGGGC GTCAAGCCGT CGTACTCGCG ACCCCGCGTC 
AGCGACGACA ACGCGTTCGC GCAGGCGCTG TTCCGCACGG CCAAGTACCG GCCGGAGTTC 
CCCTCGCAGG GCTTCGACAC GCTCGATGCA GCCCGCACCT GGGCGGCTGA ATTCGTGCAT 
TGGTACAACG TCGAGCACCG TCACAGCGGC ATCGGCTACG TCAGCCCAGC ACAGCGCCAT 
GCCGGCCACG ACCGGGCCAT CCTGGCGGCA CGGCACGCGC TGTACATCGA GGCCCAACAG 
CGCCACCCGG GGCGCTGGTC GGGCGCCACG CGAGACTGGT CGCCCATCGG CGCGGTAACC 
CTCAATCCCG AGCGCGACGA GGTGGTCAAG ATGGCTGCCG GCGATCAACA TACTCAGCAA 
GAAGCTGCGT GA
 
Protein sequence
MIGLEDRQAL SRDIDAAHAA GARLAPACEV AGIDARTLQR WKTSQGLTQG DGRPQAVRPM 
PSHALSEAER AALLAVANEP RFASTPPARI VPMLADEGVY LGSESSLARV LKAAGQNTRR 
GRAKAPKASR PPTTHIATAP GQVWCWDMTY LPAKVMGRWF HLYLILDLYS RKIVGAEVHD 
SDDSDHAVHL VRRTALAEGI AAMDTKPVLH GDNGATLKAT TVLAMLNWLG VKPSYSRPRV 
SDDNAFAQAL FRTAKYRPEF PSQGFDTLDA ARTWAAEFVH WYNVEHRHSG IGYVSPAQRH 
AGHDRAILAA RHALYIEAQQ RHPGRWSGAT RDWSPIGAVT LNPERDEVVK MAAGDQHTQQ 
EAA