| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4133 |
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| Symbol | |
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| ID | 6163762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4640357 |
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| End bp | 4641436 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641666911 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_001793150 |
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| Protein GI | 171060801 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGC CCTCCCGTGT CGCGCTGACC CTGCGGCTGG CACTGGTGCT GGCGGTGTCG
GCTTCAGCCT CGATGATGCT CACGCCGGCG GCCCTGGCCG CCGGCCCGGC GCAGCCGCCG
CCGGCCGCCG CGCCGGTGGC TGCGTCGGTC GCCTCGCCGG TCGCCGGCGC CTTCGCCACC
GTCGGTGACA CCGTCATCAG CCGTGCCGAC TACCAGCGCG CGCTGGCGGT AGCGATGCGC
AAGAAGTACT ACCACGCCAA GCCGCCCGAG GCCGAGTTCG CGCGCTTCCG GCGCGAGGTC
GGCGACGAGG TGGTCAACCG CGTGCTGCTG CTGGCCGAGG CGCGCCGGCG CGGCATCGTG
CCCGACCGCG AGCAGATCGC CGCCACCGTG GCCGGCTACG ACGCCCAGTA CGCCAGCAGC
GCCAACTGGC AGGCCAACCG CGACCAGATG CTTGCCGCCG TGCTGCCGCA GCTCGAAAGC
GAGAGCCTGC TCGAACGCCT GGGCCAACTC GTCAAGCGTG TGCCCGAGCC GGCCGAGCCG
GTGCTGCGGG CCTATCACGC GCAGCACCCG GCGCTGTTCA CCGAGCCCGA GCAGGTGCGC
CTGAGCGTGA TCCTGCTGAA GGTCGACCCC AGTTCGCCGC AGGCGATGTG GGACGCCGCC
CATGCCGAAG GCCGGCAGCT GCACCGGCGC TTGCTGGCGG GCGCCGATTT CGGCGATCTG
GCGCGGCTGC ATTCGGGCGA CCGCTCGGCC GCGGCCGGCG GCCAGATGGA CTACGCCCAC
CGCGGCATGC TGCCCGAGGC GGTGCACGGC GTGGTCGACG CGCTGCCGCC GGGCGGCCTG
TCCGCGCCGG TGCAGCTGCT CGAAGGCGTG GCGATCCTGC GCCTCGACGA CCGCCGGCCG
GCGCGCCTGC GTGCCTTCGA ACAGGTGCGG GCGCGTGCCG CCGAGCTCTG GCAGCGCGAG
CAGGCGCAGG CGCGCTGGAC CGAGCTGATC GACACCCTGC GCCGGGGCAC GGCCATCCGC
ATCGACGAGA GCCTGTATGC GCCGCAGTCC GCGACGACCG ACAAGGCGCA CGCCGGCTGA
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| Protein sequence | MTSPSRVALT LRLALVLAVS ASASMMLTPA ALAAGPAQPP PAAAPVAASV ASPVAGAFAT
VGDTVISRAD YQRALAVAMR KKYYHAKPPE AEFARFRREV GDEVVNRVLL LAEARRRGIV
PDREQIAATV AGYDAQYASS ANWQANRDQM LAAVLPQLES ESLLERLGQL VKRVPEPAEP
VLRAYHAQHP ALFTEPEQVR LSVILLKVDP SSPQAMWDAA HAEGRQLHRR LLAGADFGDL
ARLHSGDRSA AAGGQMDYAH RGMLPEAVHG VVDALPPGGL SAPVQLLEGV AILRLDDRRP
ARLRAFEQVR ARAAELWQRE QAQARWTELI DTLRRGTAIR IDESLYAPQS ATTDKAHAG
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