| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4130 |
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| Symbol | |
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| ID | 6163759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4636755 |
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| End bp | 4637807 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666908 |
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| Product | cytochrome c class I |
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| Protein accession | YP_001793147 |
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| Protein GI | 171060798 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3245] Cytochrome c5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCA CACTCCTCAC CACCCTGGCC GCGCTCGCGC TGGTGTTCGC CGCCGGGCCG
GGCCGGGCCC AGAACCCGGC CGCCGTCAAG GCGATCTACG AATCGGGCTG CATCGGCTGC
CACGGCACCG GCGTGCTCGG TGCGCCCAAG TTCGGCGACA AGGCGCAGTG GGCGCCGCGC
GCCAAGGCCG GCATCGACGC GCTGGTCAAG AGCGCCATCG CCGGCACCGA CAAGGGCATG
CCGCCCAAGG GCGGCCGCGC CGACCTGAGC CCGGCCCAGC TGCGTGCGGT GATCGAATAC
ATGATGAGCG GCGGCACAGC CAAGGCGCCC GAGGTGGCAG CCGCCAAGCC GGTGCCCGCG
AAAGCCGACC CGAAAGCCGC CGCGAAGGTC GATCCCAAGG CTGCCGCAGC GCCCGCGGCT
GACGCTGCGC CGGTTGCCGC AGCCCCTGCC GCTACCGCGG CCGCACTCGC CGATCCCGCC
CCGCCTGCTG CCACGCTGGC GGCTGCCCGC GCCGCCGCGC CCAACCCGGC ACCCAATGCC
GCGGTGAACG CCTTCAACCG CCTGCTCAAG CCGGTCGGCC GCTTCAACCG GCCGGCGGTC
GAATCGGGCA TCCACGACCC CACCAACGAC ATGACGCTGC AGCTGCAGCC GCCGGCGGTG
GCGTTCGCGG CGCTGCCCAA GAGCCCGGCG GGCAACCACG TCGACTGGGT CAAGTCGCTC
GATGGCAAGG CGATCGAGCC GCGCTGGGAC CGGCTCGACT CGGCCGCCGC CGCGGTGGTG
ATGGACCTCA ACATCGTGCG CGAGGTCAAG GGCTCGATGC CCGACGTGGT CTACCCGCAC
AAGCAGCACA CCGAGTGGCT CGACTGCAGC AACTGCCACC CGGCGATCTT CGTGCCGCAG
AAGGGCGCCA ACCAGATCAG CATGGCCAGC ATCCTGCTCG GCCAGAAGTG CGGCGTCTGC
CACGGCAAGG TGGCGTTCCC GGTGTCCGAA TGCCGGCTCT GCCACTCGAA GAAGAAGGCC
GACACCACCG TCGCCCAGGA GCGCAAGCCG TGA
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| Protein sequence | MNRTLLTTLA ALALVFAAGP GRAQNPAAVK AIYESGCIGC HGTGVLGAPK FGDKAQWAPR
AKAGIDALVK SAIAGTDKGM PPKGGRADLS PAQLRAVIEY MMSGGTAKAP EVAAAKPVPA
KADPKAAAKV DPKAAAAPAA DAAPVAAAPA ATAAALADPA PPAATLAAAR AAAPNPAPNA
AVNAFNRLLK PVGRFNRPAV ESGIHDPTND MTLQLQPPAV AFAALPKSPA GNHVDWVKSL
DGKAIEPRWD RLDSAAAAVV MDLNIVREVK GSMPDVVYPH KQHTEWLDCS NCHPAIFVPQ
KGANQISMAS ILLGQKCGVC HGKVAFPVSE CRLCHSKKKA DTTVAQERKP
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