| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4124 |
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| Symbol | |
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| ID | 6161606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4631822 |
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| End bp | 4632901 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666902 |
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| Product | NHL repeat-containing protein |
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| Protein accession | YP_001793141 |
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| Protein GI | 171060792 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.640446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCCG CGCTGCTGTG CGCCGTGCTG TCGGTGCTCG CGGCGTTGGC CGGCTGTGCC
GGGGTCGAGC CGGTACGCGG CCAGATGCAT TACGGCCTTG ACGCCCTGCC ACCGGCACAG
CGCCCGGTCT GGCCGGCGGC GCCGGAGCAG CCGCGGTTCG TCTACGCCGG CACGCTGACC
GGCGAGCCGA ACTTCCGCCG CCCCGACGCC GGCAGCAACC GCTGGCGCGC CTTCGGCCGC
TGGCTGGTCG GGCTGGACGA CGACGCGGTC AAGCCGCTGG TGCTGCAGCG GCCGTCGGCG
CTGATCGGCG ACGAGACACG CGGGCGCCTC TACGTCAGCG ACACCAGCCG GCAGGCGGTG
TTCGTGTTCG ATGAAAAGGG CGGCGAGCTG CAGCTGTGGG AGCGCGCCGC CGGGCTGCTC
AACTTCGTCG CGCCGTCCGG CCTGGCGCTG GGCCCCAACG GCGAGCTGTG GGTGGCCGAT
GCCGAACTCG GTTTTGTCGC CCGCCTCGAT GCCAAGGGCG AGCCGCTGGG CGTGATCGGC
CGCGGCCAGC TGCAGCGCCC GACCGGGCTG GCGCGTGACA CCGCCAGCGG CTGGCTCTAC
GTGGCCGACA CCTACGCGCA CCAGGTCAAG GTGTTCGACG CCGCCGGCGC GCTGCAGCAT
GTGATCGGCC AGCGTGGCGA GGGCGCGGGC GAGTTCAACT TCCCGACCCA CCTGGCCTTG
GCCGACGGCA AGCTCTACGT CACCGACACG CTCAACAACC GCGTGCAGGT CTTCAGCGCC
GCCGGCGAGC CGCTGCCCGG CCAGTTCGGC AGCCGCGGCC TGGTGCTCGG CAATCTGGTG
CGCCCGAAGG GCGTGGCGGT CGACAGCGAA GGCCGCGTCT ACGTGGTCGA GTCGTATTAC
GACAGCCTGC TGGTGTACTC GCCCAGTGGC GAATTCCTGC TACCGATCAG CGGCGGCGGC
ACCGCCATCG GCCGCTTCTA CCTGCCGGCG GGGGTGTGGG TCGACACGAG CGATCAGGTC
TTCGTCGCCG ACATGTTCAA TGGCCGCGTG CTGCGGCTGC AGTTTCTGGG GGGTGGCTGA
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| Protein sequence | MHAALLCAVL SVLAALAGCA GVEPVRGQMH YGLDALPPAQ RPVWPAAPEQ PRFVYAGTLT
GEPNFRRPDA GSNRWRAFGR WLVGLDDDAV KPLVLQRPSA LIGDETRGRL YVSDTSRQAV
FVFDEKGGEL QLWERAAGLL NFVAPSGLAL GPNGELWVAD AELGFVARLD AKGEPLGVIG
RGQLQRPTGL ARDTASGWLY VADTYAHQVK VFDAAGALQH VIGQRGEGAG EFNFPTHLAL
ADGKLYVTDT LNNRVQVFSA AGEPLPGQFG SRGLVLGNLV RPKGVAVDSE GRVYVVESYY
DSLLVYSPSG EFLLPISGGG TAIGRFYLPA GVWVDTSDQV FVADMFNGRV LRLQFLGGG
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