| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4123 |
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| Symbol | |
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| ID | 6161605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4629219 |
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| End bp | 4631822 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666901 |
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| Product | hypothetical protein |
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| Protein accession | YP_001793140 |
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| Protein GI | 171060791 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.751865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGGAC TGATGCGCGC TCGTGTCCTG GCCGCGCTGC TGCTGGTCTG CGCGCTGTCG
TGGCTGGCGG CGCCGACGCT GGCGCAGCGG GTGTCCGACG TGCGTGGCAC GCGCCACAAC
CTGTCGGTCG ACGGCCCCGG CACGACCCGT GCGGCGGCCG GTGGCACAAC GGGTGGCGTT
ACCGAGGTCT GCGTCTTCTG CCACACGCCG CACGGCGCCT CGCAGGCGGA CCTGGGCGGC
GCAGCGCTGC GTGCGCCGCT GTGGAACCGG CGCGTGCCCG CGGGCACCAC CTACACGCCC
TACACCTCGT CGTCGCTCGA CGCGCAGGTC ATCCTCGACG GCCTGAACGC GCAGCCGGGC
GGCAGCTCCA AGCTGTGCCT GTCCTGCCAC GACGGCACGC TGGCGATCGG CAACGTCAAC
GTGCTCAACG GCACGCAGAA CGTCACCATC CCGATGACCG GCACGGCAGC CGGCGGCACG
ATGCCGGCGG GCGAGGGCGC GCAGAGCGGC TTCACGCGCC TGCTCGGCAA CGACCTGCGC
AACGACCACC CGATCTCGCT GACCTTCAAC AGCGCGCTGG CCACCCGCGA CGGCGAGCTG
CGCCCGGTCG ACGCCACGCA GCGCTGGCCG GCCGGCAGCG GCACGGTGCT GGGGCTGCGC
TCGCCCGGCA ACAAGCCGCT GCTGCCGCTG GAGCCGACCG GCACGAATGG CACCGGCCAG
GTGCAGTGCG CCACCTGCCA CGACCCGCAC ATCCGCGAGC TCGACGCGAG CAAGGGCAAC
CAGAAGTTCC TGCGCACCCA GCGTTTCCAG GAGAGCGCGC CGAGCGCCGC GCACAACGTG
GCGGCCGACA TCATCTGCCT GTCCTGCCAC GACAAGAACC AGGCGATCGG CGGCTGGGCG
TATTCGGCCC ACGCACGGCC CGACGTCGCC GATGAAACCT TTCGCGACGC GGCCGCCACG
TTGCGCGAGT TCCCCACCGG CCTGCCGGTC TGGAAGGCCT CGTGCCTGAG CTGCCACGAC
ACCCACACCG TGCAGGGCGC GCGCCGCCTG ACGCGCGAGG GCACCGACGC GCCGCTGCCG
GTCGGCAACC CGCTGGCGGC CAAGCAGGGC GGCAATCCGG CGCTCGAGAA CACCTGCTAC
CAGTGCCACA CCACGGCGGC CAAGTCGGTG CTGAACTCGG TGCTGCAGGT GCCCAACATC
GAGAGCGAGT TCAGCCTCGC GGTGCGCATG CCGATCACCA CGTCGGACCA GGGCGGCGTG
ACCGACGAGG TGCACGACAT CGGCGGCAGC TTCGCCGACT TCTCGCTCGA CTGCAGCAGC
CCGGCCAACC GCTGCGGCGC CGATTTTGTC GAGTCGCGTT CGCTGCTGGC GCGCCGCCAC
GCCGAGTGCA CCGACTGCCA CAACCCGCAC CGGGTGGTGA AGTTCCGCAG CTTCGCCGGC
GGCGTGGCCG GCATCACCGG CGCGCCCGAC GCCGCCGGCA CGCACCGCCA CGACGAGGTC
ACCGGCTACA CCCACAGCAA CATCGCCTCG GGCGTGCTGC GCGGCGGCTG GGGCGTCGAG
CCCAACTACG CCTCGACCTC GTTCCAGGCG CTGCCCAGCG GCTACACCGT CAAGCGCGGC
GACCCGGGCG CGAGCATCGA CACCTCGGTC GGCGCGGCCT ACGTGACGCG TGAGTACCAG
ATCTGCCTGA AGTGCCACTC CGACTACGGC TACCCCGACA ACAACGCCTA CCCGCTCGGC
AACCGGCCGG CGCTCGGCCA CAGCGGCGGC ACGCCGGTGG GCAGCAACAA CCTGACGGTC
TACACGAATC AGGCCAAGGA GTTCCAGGCG CCGCTGAGCC ACCGCGGCGA CGGCACCGGG
CCGAACTCGG GCGCCGGCAG CATCTACGCC ACCAACAACC ACCGCTCCTG GCACCCGGTG
ATGGACGCCA CCGGCCGCAA CGCGCCCAAC GCCGCGGCCT TCCGCGCGCC GTGGGGCAAC
GCGATCGGCA GCCAGACCAT GTACTGCAGC GACTGCCACG GCGCCAACAC GCCCGACACC
AGCGTCGTGC CGCCCGGCGG CGAGGACGGC ACACCGTGGG GGCCGCACGG CTCCAACAAC
AACTTCCTGC TCAAGGGGGT GTGGAACAGC ACGGTCGGCG GCGGCGGTGG CGCGGCGGCC
AACGGCCTGT GCTTCAAGTG CCACAACCCG GCCACCTATG CCAGTGCGGG GGGCGGCGGC
ACCACCGGAT TCCGCGGCGG TGGCGAGAAC AACCTGCACG CCTTCCACAC CGACAAGATC
GGCGACATCC GCTGCAGCTG GTGCCACGTG GCGGTGCCGC ACGGCTGGAA GAACAAGGCC
CTGCTGGTCA ACCTCAACGA CGTCGGCCCC GAGGCCGGCC GCGCCGGCAA TGAAGAGTGG
CGCGAGAACG CACCCGGCCA GGCCTACAAC CAGGAGCCCT ACTACCTCAA CGCCAAGCTC
AAGGTGCGCA CCTTCGCCAC CAGCGGCAAC TGGACCGACA CCAACTGCGG CTCCAACAAC
TCGGCCACCA CCTTCGGCAC CAACGGCAAC AACACCGGCA ACGGCCGCGA CTGGATGAGG
GACGTCTGCG AAAACCCGCC ATGA
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| Protein sequence | MRGLMRARVL AALLLVCALS WLAAPTLAQR VSDVRGTRHN LSVDGPGTTR AAAGGTTGGV
TEVCVFCHTP HGASQADLGG AALRAPLWNR RVPAGTTYTP YTSSSLDAQV ILDGLNAQPG
GSSKLCLSCH DGTLAIGNVN VLNGTQNVTI PMTGTAAGGT MPAGEGAQSG FTRLLGNDLR
NDHPISLTFN SALATRDGEL RPVDATQRWP AGSGTVLGLR SPGNKPLLPL EPTGTNGTGQ
VQCATCHDPH IRELDASKGN QKFLRTQRFQ ESAPSAAHNV AADIICLSCH DKNQAIGGWA
YSAHARPDVA DETFRDAAAT LREFPTGLPV WKASCLSCHD THTVQGARRL TREGTDAPLP
VGNPLAAKQG GNPALENTCY QCHTTAAKSV LNSVLQVPNI ESEFSLAVRM PITTSDQGGV
TDEVHDIGGS FADFSLDCSS PANRCGADFV ESRSLLARRH AECTDCHNPH RVVKFRSFAG
GVAGITGAPD AAGTHRHDEV TGYTHSNIAS GVLRGGWGVE PNYASTSFQA LPSGYTVKRG
DPGASIDTSV GAAYVTREYQ ICLKCHSDYG YPDNNAYPLG NRPALGHSGG TPVGSNNLTV
YTNQAKEFQA PLSHRGDGTG PNSGAGSIYA TNNHRSWHPV MDATGRNAPN AAAFRAPWGN
AIGSQTMYCS DCHGANTPDT SVVPPGGEDG TPWGPHGSNN NFLLKGVWNS TVGGGGGAAA
NGLCFKCHNP ATYASAGGGG TTGFRGGGEN NLHAFHTDKI GDIRCSWCHV AVPHGWKNKA
LLVNLNDVGP EAGRAGNEEW RENAPGQAYN QEPYYLNAKL KVRTFATSGN WTDTNCGSNN
SATTFGTNGN NTGNGRDWMR DVCENPP
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