Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4123 |
Symbol | |
ID | 6161605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 4629219 |
End bp | 4631822 |
Gene Length | 2604 bp |
Protein Length | 867 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641666901 |
Product | hypothetical protein |
Protein accession | YP_001793140 |
Protein GI | 171060791 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01905] doubled CXXCH domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.751865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGGAC TGATGCGCGC TCGTGTCCTG GCCGCGCTGC TGCTGGTCTG CGCGCTGTCG TGGCTGGCGG CGCCGACGCT GGCGCAGCGG GTGTCCGACG TGCGTGGCAC GCGCCACAAC CTGTCGGTCG ACGGCCCCGG CACGACCCGT GCGGCGGCCG GTGGCACAAC GGGTGGCGTT ACCGAGGTCT GCGTCTTCTG CCACACGCCG CACGGCGCCT CGCAGGCGGA CCTGGGCGGC GCAGCGCTGC GTGCGCCGCT GTGGAACCGG CGCGTGCCCG CGGGCACCAC CTACACGCCC TACACCTCGT CGTCGCTCGA CGCGCAGGTC ATCCTCGACG GCCTGAACGC GCAGCCGGGC GGCAGCTCCA AGCTGTGCCT GTCCTGCCAC GACGGCACGC TGGCGATCGG CAACGTCAAC GTGCTCAACG GCACGCAGAA CGTCACCATC CCGATGACCG GCACGGCAGC CGGCGGCACG ATGCCGGCGG GCGAGGGCGC GCAGAGCGGC TTCACGCGCC TGCTCGGCAA CGACCTGCGC AACGACCACC CGATCTCGCT GACCTTCAAC AGCGCGCTGG CCACCCGCGA CGGCGAGCTG CGCCCGGTCG ACGCCACGCA GCGCTGGCCG GCCGGCAGCG GCACGGTGCT GGGGCTGCGC TCGCCCGGCA ACAAGCCGCT GCTGCCGCTG GAGCCGACCG GCACGAATGG CACCGGCCAG GTGCAGTGCG CCACCTGCCA CGACCCGCAC ATCCGCGAGC TCGACGCGAG CAAGGGCAAC CAGAAGTTCC TGCGCACCCA GCGTTTCCAG GAGAGCGCGC CGAGCGCCGC GCACAACGTG GCGGCCGACA TCATCTGCCT GTCCTGCCAC GACAAGAACC AGGCGATCGG CGGCTGGGCG TATTCGGCCC ACGCACGGCC CGACGTCGCC GATGAAACCT TTCGCGACGC GGCCGCCACG TTGCGCGAGT TCCCCACCGG CCTGCCGGTC TGGAAGGCCT CGTGCCTGAG CTGCCACGAC ACCCACACCG TGCAGGGCGC GCGCCGCCTG ACGCGCGAGG GCACCGACGC GCCGCTGCCG GTCGGCAACC CGCTGGCGGC CAAGCAGGGC GGCAATCCGG CGCTCGAGAA CACCTGCTAC CAGTGCCACA CCACGGCGGC CAAGTCGGTG CTGAACTCGG TGCTGCAGGT GCCCAACATC GAGAGCGAGT TCAGCCTCGC GGTGCGCATG CCGATCACCA CGTCGGACCA GGGCGGCGTG ACCGACGAGG TGCACGACAT CGGCGGCAGC TTCGCCGACT TCTCGCTCGA CTGCAGCAGC CCGGCCAACC GCTGCGGCGC CGATTTTGTC GAGTCGCGTT CGCTGCTGGC GCGCCGCCAC GCCGAGTGCA CCGACTGCCA CAACCCGCAC CGGGTGGTGA AGTTCCGCAG CTTCGCCGGC GGCGTGGCCG GCATCACCGG CGCGCCCGAC GCCGCCGGCA CGCACCGCCA CGACGAGGTC ACCGGCTACA CCCACAGCAA CATCGCCTCG GGCGTGCTGC GCGGCGGCTG GGGCGTCGAG CCCAACTACG CCTCGACCTC GTTCCAGGCG CTGCCCAGCG GCTACACCGT CAAGCGCGGC GACCCGGGCG CGAGCATCGA CACCTCGGTC GGCGCGGCCT ACGTGACGCG TGAGTACCAG ATCTGCCTGA AGTGCCACTC CGACTACGGC TACCCCGACA ACAACGCCTA CCCGCTCGGC AACCGGCCGG CGCTCGGCCA CAGCGGCGGC ACGCCGGTGG GCAGCAACAA CCTGACGGTC TACACGAATC AGGCCAAGGA GTTCCAGGCG CCGCTGAGCC ACCGCGGCGA CGGCACCGGG CCGAACTCGG GCGCCGGCAG CATCTACGCC ACCAACAACC ACCGCTCCTG GCACCCGGTG ATGGACGCCA CCGGCCGCAA CGCGCCCAAC GCCGCGGCCT TCCGCGCGCC GTGGGGCAAC GCGATCGGCA GCCAGACCAT GTACTGCAGC GACTGCCACG GCGCCAACAC GCCCGACACC AGCGTCGTGC CGCCCGGCGG CGAGGACGGC ACACCGTGGG GGCCGCACGG CTCCAACAAC AACTTCCTGC TCAAGGGGGT GTGGAACAGC ACGGTCGGCG GCGGCGGTGG CGCGGCGGCC AACGGCCTGT GCTTCAAGTG CCACAACCCG GCCACCTATG CCAGTGCGGG GGGCGGCGGC ACCACCGGAT TCCGCGGCGG TGGCGAGAAC AACCTGCACG CCTTCCACAC CGACAAGATC GGCGACATCC GCTGCAGCTG GTGCCACGTG GCGGTGCCGC ACGGCTGGAA GAACAAGGCC CTGCTGGTCA ACCTCAACGA CGTCGGCCCC GAGGCCGGCC GCGCCGGCAA TGAAGAGTGG CGCGAGAACG CACCCGGCCA GGCCTACAAC CAGGAGCCCT ACTACCTCAA CGCCAAGCTC AAGGTGCGCA CCTTCGCCAC CAGCGGCAAC TGGACCGACA CCAACTGCGG CTCCAACAAC TCGGCCACCA CCTTCGGCAC CAACGGCAAC AACACCGGCA ACGGCCGCGA CTGGATGAGG GACGTCTGCG AAAACCCGCC ATGA
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Protein sequence | MRGLMRARVL AALLLVCALS WLAAPTLAQR VSDVRGTRHN LSVDGPGTTR AAAGGTTGGV TEVCVFCHTP HGASQADLGG AALRAPLWNR RVPAGTTYTP YTSSSLDAQV ILDGLNAQPG GSSKLCLSCH DGTLAIGNVN VLNGTQNVTI PMTGTAAGGT MPAGEGAQSG FTRLLGNDLR NDHPISLTFN SALATRDGEL RPVDATQRWP AGSGTVLGLR SPGNKPLLPL EPTGTNGTGQ VQCATCHDPH IRELDASKGN QKFLRTQRFQ ESAPSAAHNV AADIICLSCH DKNQAIGGWA YSAHARPDVA DETFRDAAAT LREFPTGLPV WKASCLSCHD THTVQGARRL TREGTDAPLP VGNPLAAKQG GNPALENTCY QCHTTAAKSV LNSVLQVPNI ESEFSLAVRM PITTSDQGGV TDEVHDIGGS FADFSLDCSS PANRCGADFV ESRSLLARRH AECTDCHNPH RVVKFRSFAG GVAGITGAPD AAGTHRHDEV TGYTHSNIAS GVLRGGWGVE PNYASTSFQA LPSGYTVKRG DPGASIDTSV GAAYVTREYQ ICLKCHSDYG YPDNNAYPLG NRPALGHSGG TPVGSNNLTV YTNQAKEFQA PLSHRGDGTG PNSGAGSIYA TNNHRSWHPV MDATGRNAPN AAAFRAPWGN AIGSQTMYCS DCHGANTPDT SVVPPGGEDG TPWGPHGSNN NFLLKGVWNS TVGGGGGAAA NGLCFKCHNP ATYASAGGGG TTGFRGGGEN NLHAFHTDKI GDIRCSWCHV AVPHGWKNKA LLVNLNDVGP EAGRAGNEEW RENAPGQAYN QEPYYLNAKL KVRTFATSGN WTDTNCGSNN SATTFGTNGN NTGNGRDWMR DVCENPP
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