| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4116 |
|---|
| Symbol | |
|---|
| ID | 6163010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 4622746 |
|---|
| End bp | 4623120 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641666894 |
|---|
| Product | cytochrome c class I |
|---|
| Protein accession | YP_001793133 |
|---|
| Protein GI | 171060784 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.115646 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCAAGG GCGCGAACGA GCGGACGATG CGGCAGGGGA TTGCCAAAGA TGAGAAGGCG
CCGCGCCGGC GGGGCTCGAC GGCGGCGCCC TGGCTGCTGA TCGCGGCGTT GATGGCCTGG
CCGGCGGCGC AGGCCGCCGA CACCGTCAAG GGCGCCGAGC TCTACCGCCT GCATTGCGCC
GGCTGCCACG GCGGCGACGG CCGGCCGGTG ATGCCGATGG CACCCGACTT CTCGCGCCCG
ACCACGCTGC TCAAACCCGA CCTCACGCTG CTGGCCGCGA TCCGCAACGG CCGCGGCGCC
ATGCCGGCCT ACCAGGGCCT GCTGCGCGAC CGAGACATCC TCGACGTCGT CGCCTACCTG
CGCACCTTTC GATGA
|
|---|
| Protein sequence | MAKGANERTM RQGIAKDEKA PRRRGSTAAP WLLIAALMAW PAAQAADTVK GAELYRLHCA
GCHGGDGRPV MPMAPDFSRP TTLLKPDLTL LAAIRNGRGA MPAYQGLLRD RDILDVVAYL
RTFR
|
|---|
| |