| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4115 |
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| Symbol | |
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| ID | 6163009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4621676 |
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| End bp | 4622749 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666893 |
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| Product | two component regulator propeller domain-containing protein |
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| Protein accession | YP_001793132 |
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| Protein GI | 171060783 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3292] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0684737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTG AACTGCTTTT TCGCGGTCTG CTCTTGCACG CCATGTTCGC GGCTGCGGCG
CTGGCCGCCA GCGCGCTCGC CTGGGGCCAG CCGGCCGCCC GCGTCAAGGA CGTCTACGAA
GTCGGCCCGA CGGTCTACGT GCGTGCGCTC GCGGTCGAGC CGGCGCGCGG CGCGATCTGG
GTCGGCACCT CGGCCGGCGT GCACGAGGTC GACCTGGCCG ACGGCCGGCT GCGCAACACC
TTCACCCGCA AGGACGGGCT GGCCAACGAA TACGTGTTCG CGGTCGGCCT CGACCGCGAC
GGCCACAAGT GGTTCGGCAC CAATGCCGGC GGTGTGTCGC GCTACAAGGA CGGCGCCTGG
AAGACCTTCT TCCCGATGCA CGGCCTGGCC GACTACTGGG TCTATTCCTT CGCCCAGCAG
CGCAACGGCG ACTTCTGGAT CGGCACCTGG GCCGGCGTCA ACAAGGTCGC GCCCAAGACC
GGCCGCTTCA CCACCTACGT GAAAGAGCTG GTCAACGAGT GGGTCTACGG CATCAGCGTC
GACGCACGCG ACCGGGTCTG GTTCGGCACC GAGGGCGGGG TGTCGATGTA CGACGGCAAG
CGCTGGGTGG CGTGGACACA CAAGGACGGC CTGGGCGCGC CCAACACCGA CAACCTGCCG
TTCAGCGCCA ACACCGGCCT GGGCACGCGC ACCCGCCACG ACCTGTCGGT GGCGGCCGAG
GGCCAGTCGA CCTACAACCC GAACTACGTG TTCGCGATTC TTGCGGCGCG CGACGGCTCG
ATCTGGGCCG GCACCTGGGG CGGCGGCGTG GCGCGTTTCG ACGGCAAGAC CTGGCACAAC
CTGACCCGCG CCGACGGCCT GGCCGGCAAC ATCGTCTACA GCCTGGCGCA GGACCGCGCC
GGCGTTTTCT GGTTCGGCAC CGACCGCGGC GTGTCGCGCT ACGACGGCCA GCGCTGGCAG
ACCCTCGGCG TCAGCGACGG CCTGCTCGAC AGCAACGTCT ACGCCATCGC GGTCGCACCC
GACGGCGACA TCTGGGCCGG CACGCGCAAG GGCGTGGCCC GCATCGCGCC ATGA
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| Protein sequence | MKPELLFRGL LLHAMFAAAA LAASALAWGQ PAARVKDVYE VGPTVYVRAL AVEPARGAIW
VGTSAGVHEV DLADGRLRNT FTRKDGLANE YVFAVGLDRD GHKWFGTNAG GVSRYKDGAW
KTFFPMHGLA DYWVYSFAQQ RNGDFWIGTW AGVNKVAPKT GRFTTYVKEL VNEWVYGISV
DARDRVWFGT EGGVSMYDGK RWVAWTHKDG LGAPNTDNLP FSANTGLGTR TRHDLSVAAE
GQSTYNPNYV FAILAARDGS IWAGTWGGGV ARFDGKTWHN LTRADGLAGN IVYSLAQDRA
GVFWFGTDRG VSRYDGQRWQ TLGVSDGLLD SNVYAIAVAP DGDIWAGTRK GVARIAP
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