Gene Lcho_4078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4078 
Symbol 
ID6162030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4571006 
End bp4571467 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content65% 
IMG OID641666856 
Producthypothetical protein 
Protein accessionYP_001793095 
Protein GI171060746 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000216879 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGTCA GCGTCAGCGT CAACGCTCTT TCGGTCGTGC ATGCCGGCAG CAGCGGCATC 
AGCACGGCCT TCCCCGACGT GTGCAAGACA CCGGCACCAC CCGCGCCTTT CGTGCCGATC
CCGTATCCCA ACATCGCGCA GTCGTCCGAC ACCGCCGCGG GTTCGTCCAC CGTCAAGTGC
GACGGCCATC CGACCTGCGT GAAGGACTCG AACTTCAAGA TGAGCAGCGG CGACGAAGCG
GGCACCGCCG GCGGCGGCAT GGTGTCGAGC AAGATCAAGG GCAAGGCCGA GTTCGTGAAC
TTCTCGTTCG ACGTGAAGTT CGAGGGCAAG AACGTCGCCC GCGCCTTCGA CCTGATGCTG
CACAACGACA AGAACACGCC GCCCTTCCCC GTGCTGCAGG GCCCGGCCAT CGCCATGGGC
GGCGACAAGC CGGTGTGCTA CGTCTGTGAA GAGCCGATGT GA
 
Protein sequence
MAVSVSVNAL SVVHAGSSGI STAFPDVCKT PAPPAPFVPI PYPNIAQSSD TAAGSSTVKC 
DGHPTCVKDS NFKMSSGDEA GTAGGGMVSS KIKGKAEFVN FSFDVKFEGK NVARAFDLML
HNDKNTPPFP VLQGPAIAMG GDKPVCYVCE EPM