Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4078 |
Symbol | |
ID | 6162030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 4571006 |
End bp | 4571467 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641666856 |
Product | hypothetical protein |
Protein accession | YP_001793095 |
Protein GI | 171060746 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000000216879 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGTCA GCGTCAGCGT CAACGCTCTT TCGGTCGTGC ATGCCGGCAG CAGCGGCATC AGCACGGCCT TCCCCGACGT GTGCAAGACA CCGGCACCAC CCGCGCCTTT CGTGCCGATC CCGTATCCCA ACATCGCGCA GTCGTCCGAC ACCGCCGCGG GTTCGTCCAC CGTCAAGTGC GACGGCCATC CGACCTGCGT GAAGGACTCG AACTTCAAGA TGAGCAGCGG CGACGAAGCG GGCACCGCCG GCGGCGGCAT GGTGTCGAGC AAGATCAAGG GCAAGGCCGA GTTCGTGAAC TTCTCGTTCG ACGTGAAGTT CGAGGGCAAG AACGTCGCCC GCGCCTTCGA CCTGATGCTG CACAACGACA AGAACACGCC GCCCTTCCCC GTGCTGCAGG GCCCGGCCAT CGCCATGGGC GGCGACAAGC CGGTGTGCTA CGTCTGTGAA GAGCCGATGT GA
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Protein sequence | MAVSVSVNAL SVVHAGSSGI STAFPDVCKT PAPPAPFVPI PYPNIAQSSD TAAGSSTVKC DGHPTCVKDS NFKMSSGDEA GTAGGGMVSS KIKGKAEFVN FSFDVKFEGK NVARAFDLML HNDKNTPPFP VLQGPAIAMG GDKPVCYVCE EPM
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