| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4071 |
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| Symbol | |
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| ID | 6162157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4563703 |
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| End bp | 4565160 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666849 |
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| Product | cation transporter |
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| Protein accession | YP_001793088 |
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| Protein GI | 171060739 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000478231 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCAAGC TGCTTGGCGT GCTGCCGGTG CTCGGCGTGG TGCTGGTGGT GTTCTGCCTG
ACGATGCTGG TGCCGCTGGC GTTTTCCTGG GTGCAGGACG ACGGTGCCCA GTTCGACCAC
CTGCGCGCGA TCGCCAGCAC GCTGGCCTGC GGCATCGTGC TGCGACTGCT CGGCCACCGT
TATCAGCGCG AACTGCAACC GCGCGACGGC TTCGTGCTGG TCGCGCTGGT CTGGACGGTG
CTGCCGGCCT TCGGCGCCTT GCCGCTGTGG CTGGCGATCG ACGGCCTGAG CCCCACCGAC
GCCTATTTCG AGGCGGTGTC GGGCCTCACC ACCACCGGCG CCACCGTGCT GACAGGCCTG
GAGCGGCTGC CCGTATCGAT CAACGTGTGG CGCTGCCTGA TGGTGCTGAT CGGTGGCATG
GGCATCGTGG TGCTGGCGGT GGCCGTGCTT CCGTTGCTGG GCGTGGGTGG CGCCCAGCTC
TTCAAGGCCG AGTCCGCCGG TCCGATGAAG GACGAGAAGC TGACCCCGCG CATCGCCGAA
ACCGCACGCG GGCTGTGGAG CGTCTACTTC GTGTTCGCGG TGGCCTGCTG CCTCGCCTAC
CGCTGGGCCG GCATGGGCTG GACCGACGCC TTCATGCACA TGTGCAGCAC GATGGGCCTG
GGCGGTTTTG CGGCCTACGA CGCCAGCTTC GGCGCCTTCG ACTCGCCCCG CATCGAGGCG
GTCGCGATCG TCTTCATGCT GCTGGCGGGT ATCAACTTCG CGCTCTATTT CATGGCCTTC
AAGCGCCGCA GCCTGCGCGG CCTCTGGCGC AACATCGAGG TGCGTGGTTA CGTGATCCTG
ATGTTCGGTG CGGTGATGTT GATCGCGGCC TTCCTGGCCA CGCACCAGGT CTACCCCACG
TTCGGCGAAT CATTGCGGCA TGCCGCCTTC AGCGTGGTCT CGGTGGCCAC CACCACCGGT
TTCGCCACCG TGGACTACGC GCTGTGGCCG GCCTTCGCCC CGGTGCTGAT GCTGCTTCTG
TGCGGCTTTG CCACCTGCGC GGGCTCGACC GGCGGCGGCA TCAAGCTGAT CCGTGCGCTG
CTGCTGATGA AACAGGCCCA GCGCGAGCTG ATCCGCATCG TGCATCCGCG CGCGGTGGTG
CCGGTCACGC TGGGTGGCCA GGTCGTGCCG CAGCAGGTGC TGATCTCGGT GATCGCCTAC
ATGCTGGCCT ATGGCGCGGT CACTCTCATC GCTTCACTCA TGCTGCTGTT CACCGGGCTG
GACATGGTCA GCGCCGTCAC CGCGGTGATC GCCTGCATCA ACAACACCGG GCCCGGCCTG
GGGCAGGTCG GCCCCTCGGG GAACTACCAG GGCCTGAGCG ACGTGCAGAC ATGGATCTGC
AGCGCCACCA TGCTGCTCGG CCGGCTCGAA CTGCTGAGCC TGCTGGTGCT GTTCACGCCG
ACGTTCTGGC GGGCCTGA
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| Protein sequence | MRKLLGVLPV LGVVLVVFCL TMLVPLAFSW VQDDGAQFDH LRAIASTLAC GIVLRLLGHR
YQRELQPRDG FVLVALVWTV LPAFGALPLW LAIDGLSPTD AYFEAVSGLT TTGATVLTGL
ERLPVSINVW RCLMVLIGGM GIVVLAVAVL PLLGVGGAQL FKAESAGPMK DEKLTPRIAE
TARGLWSVYF VFAVACCLAY RWAGMGWTDA FMHMCSTMGL GGFAAYDASF GAFDSPRIEA
VAIVFMLLAG INFALYFMAF KRRSLRGLWR NIEVRGYVIL MFGAVMLIAA FLATHQVYPT
FGESLRHAAF SVVSVATTTG FATVDYALWP AFAPVLMLLL CGFATCAGST GGGIKLIRAL
LLMKQAQREL IRIVHPRAVV PVTLGGQVVP QQVLISVIAY MLAYGAVTLI ASLMLLFTGL
DMVSAVTAVI ACINNTGPGL GQVGPSGNYQ GLSDVQTWIC SATMLLGRLE LLSLLVLFTP
TFWRA
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